RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 FAM240BA0A1B0GVZ2 78 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 RPS10-NUDT3A0A1W2PQS6 291 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 ETV3LQ6ZN32 361 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 LYG2Q86SG7 212 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 ENKURQ8TC29 256 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 RAX2Q96IS3 184 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 HMX3A6NHT5 357 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 RPP30P78346 268 aaKnown RBP8.3□□□□□ -1.08
UBR4-208ENST00000459947 SP6Q3SY56 376 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 OR11H1Q8NG94 326 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 PEMTQ9UBM1 199 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 TRAV3A0A0B4J244 114 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 SPSB3Q6PJ21 355 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 CIB3Q96Q77 187 aaPredicted RBP8.29□□□□□ -1.08
UBR4-208ENST00000459947 HIPK2Q9H2X6 1198 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 PRAF2O60831 178 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 SCAF4O95104 1147 aaKnown RBP8.29□□□□□ -1.08
UBR4-208ENST00000459947 GPN1Q9HCN4 374 aaPredicted RBP8.29□□□□□ -1.08
UBR4-208ENST00000459947 OVOL1O14753 267 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 HTR2BP41595 481 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 SLC25A24Q6NUK1 477 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 GPR146Q96CH1 333 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 PALMDQ9NP74 551 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 CACNG5Q9UF02 275 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 ST8SIA3O43173 380 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 GGCTO75223 188 aaKnown RBP8.29□□□□□ -1.08
UBR4-208ENST00000459947 ETFRF1Q6IPR1 90 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 C1QL4Q86Z23 238 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 OR1S1Q8NH92 325 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 C20orf85Q9H1P6 137 aa8.29□□□□□ -1.08
UBR4-208ENST00000459947 WIPF1O43516 503 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 OR2J3O76001 311 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 TCRBP04435 133 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 AREGP15514 252 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 FCGR2BP31994 310 aaPredicted RBP8.28□□□□□ -1.08
UBR4-208ENST00000459947 RPEL1Q2QD12 228 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 C4orf46Q504U0 113 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 SAMD5Q5TGI4 173 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 C9orf170A2RU37 121 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 HLA-AP01891 365 aaKnown RBP8.28□□□□□ -1.08
UBR4-208ENST00000459947 IL5P05113 134 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 H2AFB2P0C5Z0 115 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 SUPT4H1P63272 117 aaKnown RBP8.28□□□□□ -1.08
UBR4-208ENST00000459947 PPP1R1AQ13522 171 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 C15orf32Q32M92 178 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 NMSQ5H8A3 153 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 KPRPQ5T749 579 aaPredicted RBP8.28□□□□□ -1.08
UBR4-208ENST00000459947 OR2K2Q8NGT1 345 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 CEBPZOSA8MTT3 80 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 PLA2G10O15496 165 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 OR4E1P0C645 316 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 FAM106AQ4KMX7 169 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 NSG2Q9Y328 171 aa8.28□□□□□ -1.08
UBR4-208ENST00000459947 LINC00854A0A1B0GVQ3 168 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 CGB1A6NKQ9 187 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 ELLP55199 621 aaPredicted RBP8.27□□□□□ -1.09
UBR4-208ENST00000459947 FANCD2OSQ96PS1 177 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 OR4C12Q96R67 309 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 A0A0B4J293 547 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 NPBWR1P48145 328 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 MFAP4P55083 255 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 RNASEH2CQ8TDP1 164 aaKnown RBP8.27□□□□□ -1.09
UBR4-208ENST00000459947 CASTOR1Q8WTX7 329 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 MARC2Q969Z3 335 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 BSCL2Q96G97 398 aaPredicted RBP8.27□□□□□ -1.09
UBR4-208ENST00000459947 HEYLQ9NQ87 328 aaPredicted RBP8.27□□□□□ -1.09
UBR4-208ENST00000459947 FBN1P35555 2871 aaKnown RBP8.27□□□□□ -1.09
UBR4-208ENST00000459947 IGHV3-11P01762 117 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 SLC25A4P12235 298 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 BTCP35070 178 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 BMI1P35226 326 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 WT1-ASQ06250 92 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 LHFPL5Q8TAF8 219 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 RBMXL1Q96E39 390 aaKnown RBP8.27□□□□□ -1.09
UBR4-208ENST00000459947 SIGLEC8Q9NYZ4 499 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 HSPB7Q9UBY9 170 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 U3KQ87 197 aa8.27□□□□□ -1.09
UBR4-208ENST00000459947 IGHV4OR15-8A0A075B7B6 117 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 A0A087WW49 117 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 LGALS9O00182 355 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 C2orf83Q53S99 150 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 DUSP18Q8NEJ0 188 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 C21orf62Q9NYP8 219 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 A0A1B0GW64 132 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 ARL3P36405 182 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 RELQ04864 619 aaPredicted RBP8.26□□□□□ -1.09
UBR4-208ENST00000459947 DHRS2Q13268 280 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 PVRIGQ6DKI7 326 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 GPHB5Q86YW7 130 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 MITD1Q8WV92 249 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 TRAV30A0A087WSZ9 112 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 SEC14L6B5MCN3 397 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 NDUFB8O95169 186 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 HOXD3P31249 432 aaPredicted RBP8.26□□□□□ -1.09
UBR4-208ENST00000459947 TNFRSF9Q07011 255 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 ZNF502Q8TBZ5 544 aa8.26□□□□□ -1.09
UBR4-208ENST00000459947 ZNF431Q8TF32 576 aaPredicted RBP8.26□□□□□ -1.09
UBR4-208ENST00000459947 APELAP0DMC3 54 aa8.25□□□□□ -1.09
UBR4-208ENST00000459947 RAB11AP62491 216 aa8.25□□□□□ -1.09
UBR4-208ENST00000459947 PLET1Q6UQ28 207 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms