RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	IL22RA2	Q969J5	263 aa		7.88	□□□□□ -1.15
MRPL55-223	ENST00000459783	ZNF414	Q96IQ9	312 aa		7.88	□□□□□ -1.15
MRPL55-223	ENST00000459783	USMG5	Q96IX5	58 aa		7.88	□□□□□ -1.15
MRPL55-223	ENST00000459783	CACNG5	Q9UF02	275 aa		7.88	□□□□□ -1.15
MRPL55-223	ENST00000459783	F11R	Q9Y624	299 aa	Known RBP	7.88	□□□□□ -1.15
MRPL55-223	ENST00000459783	CMYA5	Q8N3K9	4069 aa		7.88	□□□□□ -1.15
MRPL55-223	ENST00000459783	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783		A0A0B4J2A0	478 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	C9orf170	A2RU37	121 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783		F8W735	103 aa	Predicted RBP	7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	LINC01619	G3V211	115 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	HSPB1	P04792	205 aa	Known RBP	7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	HOXD3	P31249	432 aa	Predicted RBP	7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	RAB25	P57735	213 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	ATP5G2	Q06055	141 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	ASAH1	Q13510	395 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	THOC7	Q6I9Y2	204 aa	Known RBP	7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	FAM219A	Q8IW50	185 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	LGI3	Q8N145	548 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	LRTM2	Q8N967	370 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	OR52B4	Q8NGK2	314 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	RRNAD1	Q96FB5	475 aa	Known RBP	7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	WDR12	Q9GZL7	423 aa	Known RBP	7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	C20orf85	Q9H1P6	137 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	FKBP11	Q9NYL4	201 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	SHPK	Q9UHJ6	478 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	KCNIP3	Q9Y2W7	256 aa		7.87	□□□□□ -1.15
MRPL55-223	ENST00000459783	IGHV3-21	A0A0B4J1V1	117 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783		A0A0G2JLM5	398 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	PPP5D1	E7EU14	171 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	INS-IGF2	F8WCM5	200 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783		K7EIM0	57 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	PITX3	O75364	302 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	ATG12	O94817	140 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	NXPH3	O95157	252 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	HLA-A	P01891	365 aa	Known RBP	7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	PRB2	P02812	416 aa	Predicted RBP	7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	TCRB	P04435	133 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	OR4E1	P0C645	316 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	OR8U8	P0C7N1	319 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	KRTAP10-11	P60412	298 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	UBE2M	P61081	183 aa	Known RBP	7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	DHRS2	Q13268	280 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	PDLIM3	Q53GG5	364 aa	Predicted RBP	7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	PVRIG	Q6DKI7	326 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	ZNF114	Q8NC26	417 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	RNASE11	Q8TAA1	199 aa	Known RBP	7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	ZNF502	Q8TBZ5	544 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	TMEM170A	Q8WVE7	144 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	RCC1L	Q96I51	464 aa	Known RBP	7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	PEF1	Q9UBV8	284 aa	Known RBP	7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	TG	P01266	2768 aa		7.86	□□□□□ -1.15
MRPL55-223	ENST00000459783	TRAV6	A0A075B6T7	132 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	CENPX	A8MT69	81 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	MPTX1	A8MV57	137 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783		I3L2K1	104 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	ADAP1	O75689	374 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	IFNA17	P01571	189 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	RNASE2	P10153	161 aa	Known RBP	7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	DEFA4	P12838	97 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	HIST1H1B	P16401	226 aa	Known RBP	7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	MECP2	P51608	486 aa	Known RBP	7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	KLF5	Q13887	457 aa	Predicted RBP	7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	BSX	Q3C1V8	233 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	SLC25A24	Q6NUK1	477 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	IL34	Q6ZMJ4	242 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	LYG2	Q86SG7	212 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	OR1P1	Q8NH06	330 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	DPF1	Q92782	380 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	PLEKHA3	Q9HB20	300 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	RANGRF	Q9HD47	186 aa	Predicted RBP	7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	NUDT15	Q9NV35	164 aa		7.85	□□□□□ -1.15
MRPL55-223	ENST00000459783	OVOL1	O14753	267 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	DHFR	P00374	187 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	IGHV3-48	P01763	117 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	HOXB5	P09067	269 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	SULT1A3	P0DMM9	295 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	SULT1A4	P0DMN0	295 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	ANXA3	P12429	323 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	EDN2	P20800	178 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	SYNJ2BP	P57105	145 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	SPCS3	P61009	180 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	SRPX	P78539	464 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	SMCO1	Q147U7	214 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	GGNBP1	Q5YKI7	109 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	CLEC19A	Q6UXS0	136 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	ADAMTSL5	Q6ZMM2	481 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	OR52E5	Q8NH55	327 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	SCARB1	Q8WTV0	552 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	SEC22C	Q9BRL7	303 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	ZC4H2	Q9NQZ6	224 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	MRPL36	Q9P0J6	103 aa	Known RBP	7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783	HSPB7	Q9UBY9	170 aa		7.84	□□□□□ -1.15
MRPL55-223	ENST00000459783		A0A1B0GU03	582 aa		7.83	□□□□□ -1.16
MRPL55-223	ENST00000459783	DUXB	A0A1W2PPF3	345 aa		7.83	□□□□□ -1.16
MRPL55-223	ENST00000459783	SEC14L6	B5MCN3	397 aa		7.83	□□□□□ -1.16
MRPL55-223	ENST00000459783	OR2C1	O95371	312 aa		7.83	□□□□□ -1.16
MRPL55-223	ENST00000459783	DUS4L	O95620	317 aa	Known RBP	7.83	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms