RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 J3QR06 171 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 PGLYRP1O75594 196 aaPredicted RBP8.36□□□□□ -1.07
USP39-210ENST00000459775 TOX4O94842 621 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 CTSDP07339 412 aaPredicted RBP8.36□□□□□ -1.07
USP39-210ENST00000459775 MMP9P14780 707 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 C4BPBP20851 252 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 FABP9Q0Z7S8 132 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 DHRS2Q13268 280 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 OCIAD2Q56VL3 154 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 TBC1D26Q86UD7 250 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 RTN4IP1Q8WWV3 396 aaPredicted RBP8.36□□□□□ -1.07
USP39-210ENST00000459775 WDR89Q96FK6 387 aaPredicted RBP8.36□□□□□ -1.07
USP39-210ENST00000459775 TP53RKQ96S44 253 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.36□□□□□ -1.07
USP39-210ENST00000459775 C14orf166Q9Y224 244 aaKnown RBP8.36□□□□□ -1.07
USP39-210ENST00000459775 INSIG2Q9Y5U4 225 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 ACANP16112 2415 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 F6UZH7 168 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 CLDN34H7C241 214 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 HLA-AP01891 365 aaKnown RBP8.35□□□□□ -1.07
USP39-210ENST00000459775 IGHV4-31P0DP07 118 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 UCP3P55916 312 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 BRWD1-AS2P59051 145 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 FCN2Q15485 313 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 SLC25A48Q6ZT89 311 aaKnown RBP8.35□□□□□ -1.07
USP39-210ENST00000459775 PCNPQ8WW12 178 aaKnown RBP8.35□□□□□ -1.07
USP39-210ENST00000459775 MCRIP2Q9BUT9 160 aaKnown RBP8.35□□□□□ -1.07
USP39-210ENST00000459775 SSBP4Q9BWG4 385 aaPredicted RBP8.35□□□□□ -1.07
USP39-210ENST00000459775 CSPG4Q6UVK1 2322 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 B4DSR2 109 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 M0R1X1 148 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 GPR31O00270 319 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 MPPED1O15442 326 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 OR5AC1P0C628 307 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 PRTN3P24158 256 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 CKS1BP61024 79 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 LOXL1Q08397 574 aaPredicted RBP8.35□□□□□ -1.07
USP39-210ENST00000459775 KIAA0141Q14154 515 aaPredicted RBP8.35□□□□□ -1.07
USP39-210ENST00000459775 DCAF12L2Q5VW00 463 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 RUSC1-AS1Q66K80 236 aa8.35□□□□□ -1.07
USP39-210ENST00000459775 NAV3Q8IVL0 2385 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 IGHV3-72A0A0B4J1Y9 119 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 M0R1W7 72 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 IGLV1-47P01700 117 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 SNRPCP09234 159 aaKnown RBP8.34□□□□□ -1.07
USP39-210ENST00000459775 EPHA1P21709 976 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 UBE2KP61086 200 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 PAX8Q06710 450 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 EIF4EBP1Q13541 118 aaPredicted RBP8.34□□□□□ -1.07
USP39-210ENST00000459775 SURF2Q15527 256 aaPredicted RBP8.34□□□□□ -1.07
USP39-210ENST00000459775 FAM74A1Q5RGS3 127 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 BRD3OSQ6XYD6 125 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 DYNAPQ8N1N2 210 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 ZNF645Q8N7E2 425 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 OR4P4Q8NGL7 312 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 OR9G1Q8NH87 305 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 RPUSD4Q96CM3 377 aaKnown RBP8.34□□□□□ -1.07
USP39-210ENST00000459775 CLEC7AQ9BXN2 247 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 OR51J1Q9H342 316 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 C7orf69Q9H7B7 122 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 CR1P17927 2039 aa8.34□□□□□ -1.07
USP39-210ENST00000459775 CRYM-AS1A6NIL9 109 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 ZNF785A8K8V0 405 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 SIX6O95475 246 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 LY6G6DO95868 133 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 IGHV4-38-2P0DP08 117 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 CXCL3P19876 107 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 MRPL23Q16540 153 aaKnown RBP8.33□□□□□ -1.08
USP39-210ENST00000459775 TMEM128Q5BJH2 165 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 Q71RC1 249 aaPredicted RBP8.33□□□□□ -1.08
USP39-210ENST00000459775 LINC01356Q8N9X3 169 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 C2CD4CQ8TF44 421 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 MRPL20Q9BYC9 149 aaKnown RBP8.33□□□□□ -1.08
USP39-210ENST00000459775 NAA60Q9H7X0 242 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 HILPDAQ9Y5L2 63 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 TLN2Q9Y4G6 2542 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 C3orf85A0A1B0GTC6 90 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 C7orf66A4D0T2 115 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 AP4M1O00189 453 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 PAGE4O60829 102 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 CD24P25063 80 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 CAMPP49913 170 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 UBE2V1Q13404 147 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 IZUMO4Q1ZYL8 232 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 ZNF626Q68DY1 528 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 CMTM1Q8IZ96 169 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 PIP4P2Q8N4L2 257 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 SMR3AQ99954 134 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 HSPB7Q9UBY9 170 aa8.33□□□□□ -1.08
USP39-210ENST00000459775 CENPVL3A0A0U1RRI6 287 aa8.32□□□□□ -1.08
USP39-210ENST00000459775 BUB1B-PAK6H3BSN5 160 aa8.32□□□□□ -1.08
USP39-210ENST00000459775 SFT2D2O95562 160 aa8.32□□□□□ -1.08
USP39-210ENST00000459775 CT45A6P0DMU7 189 aa8.32□□□□□ -1.08
USP39-210ENST00000459775 CT45A5P0DMU8 189 aa8.32□□□□□ -1.08
USP39-210ENST00000459775 CT45A7P0DMV0 189 aa8.32□□□□□ -1.08
USP39-210ENST00000459775 S100A2P29034 98 aa8.32□□□□□ -1.08
USP39-210ENST00000459775 ZNF816Q0VGE8 651 aaPredicted RBP8.32□□□□□ -1.08
USP39-210ENST00000459775 HLA-DRB5Q30154 266 aa8.32□□□□□ -1.08
USP39-210ENST00000459775 ZNF585BQ52M93 769 aa8.32□□□□□ -1.08
USP39-210ENST00000459775 DGAT2L7PQ6IED9 249 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms