RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 SVEP1Q4LDE5 3571 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 IGHV3-21A0A0B4J1V1 117 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 KANTRA0A1W2PQU2 76 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 J3QLI3 93 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 FGF2P09038 288 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 MDKP21741 143 aaPredicted RBP6.89□□□□□ -1.31
RIF1-208ENST00000457745 GATA3P23771 443 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 ARHGDIBP52566 201 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 TAS2R30P59541 319 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 RPL23AP62750 156 aaKnown RBP6.89□□□□□ -1.31
RIF1-208ENST00000457745 LRRC75BQ2VPJ9 315 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 CCDC144NLQ6NUI1 221 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 SLC51BQ86UW2 128 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 MMD2Q8IY49 270 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 STPG2Q8N412 459 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 C5orf56Q8N8D9 126 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 HSD17B11Q8NBQ5 300 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 SLC24A4Q8NFF2 622 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 OR1L8Q8NGR8 309 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 OR5B3Q8NH48 314 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 TMED6Q8WW62 240 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 ZNF414Q96IQ9 312 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 CXorf58Q96LI9 332 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 RNF5Q99942 180 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 RSG1Q9BU20 258 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 VSIRQ9H7M9 311 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 HEYLQ9NQ87 328 aaPredicted RBP6.89□□□□□ -1.31
RIF1-208ENST00000457745 ZC4H2Q9NQZ6 224 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 TNFRSF19Q9NS68 423 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 NOTCH2Q04721 2471 aa6.89□□□□□ -1.31
RIF1-208ENST00000457745 UBE2L5PA0A1B0GUS4 154 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 NCBP2LA6PVI3 153 aaKnown RBP6.88□□□□□ -1.31
RIF1-208ENST00000457745 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 CD5LO43866 347 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 MED6O75586 246 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 IFNA10P01566 189 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 FAM157CP0CG43 387 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 OR13C7P0DN81 318 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 DEFA4P12838 97 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 PVALBP20472 110 aaPredicted RBP6.88□□□□□ -1.31
RIF1-208ENST00000457745 NPY1RP25929 384 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 ATP6V0CP27449 155 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 BLCAPP62952 87 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 UBA52P62987 128 aaKnown RBP6.88□□□□□ -1.31
RIF1-208ENST00000457745 FXYD3Q14802 87 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 VWC2Q2TAL6 325 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 TMEM95Q3KNT9 176 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 PVRIGQ6DKI7 326 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 ETV3LQ6ZN32 361 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 TMEM182Q6ZP80 229 aaPredicted RBP6.88□□□□□ -1.31
RIF1-208ENST00000457745 VSTM2AQ8TAG5 236 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 SSMEM1Q8WWF3 244 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 RBM14Q96PK6 669 aaKnown RBP6.88□□□□□ -1.31
RIF1-208ENST00000457745 DUX5Q96PT3 197 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 ATP5SQ99766 215 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 GINS3Q9BRX5 216 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 SLC25A33Q9BSK2 321 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 COMMD5Q9GZQ3 224 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 GSX1Q9H4S2 264 aaPredicted RBP6.88□□□□□ -1.31
RIF1-208ENST00000457745 PLEKHA3Q9HB20 300 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 ZFP57Q9NU63 452 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 LINC00527Q9UJ94 153 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 STRAPQ9Y3F4 350 aaKnown RBP6.88□□□□□ -1.31
RIF1-208ENST00000457745 S4R3C0 116 aa6.88□□□□□ -1.31
RIF1-208ENST00000457745 IGKV1OR2-108A0A075B7D4 117 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 INS-IGF2F8WCM5 200 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 G3V318 75 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 ATP6V0E1O15342 81 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 SOX15O60248 233 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 LY6G6DO95868 133 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 NMBP08949 121 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 IER3P46695 156 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 FHITP49789 147 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 BAXQ07812 192 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 PLGLAQ15195 96 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 C2orf83Q53S99 150 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 C19orf54Q5BKX5 351 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 ACSM6Q6P461 480 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 C9orf139Q6ZV77 190 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 Q71RC1 249 aaPredicted RBP6.87□□□□□ -1.31
RIF1-208ENST00000457745 SSX7Q7RTT5 188 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 BAP18Q8IXM2 172 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 SLC7A5P1Q8MH63 180 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 SIGLECL1Q8N7X8 197 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 OR1S2Q8NGQ3 325 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 OR2T6Q8NHC8 308 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 SLC25A31Q9H0C2 315 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 YAE1D1Q9NRH1 226 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 OTOGQ6ZRI0 2925 aa6.87□□□□□ -1.31
RIF1-208ENST00000457745 BAHCC1Q9P281 2608 aa6.86□□□□□ -1.31
RIF1-208ENST00000457745 IGKV1D-37A0A075B6S9 117 aa6.86□□□□□ -1.31
RIF1-208ENST00000457745 PIGBOS1A0A0B4J2F0 54 aa6.86□□□□□ -1.31
RIF1-208ENST00000457745 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.86□□□□□ -1.31
RIF1-208ENST00000457745 HLA-DRB1P01911 266 aa6.86□□□□□ -1.31
RIF1-208ENST00000457745 FBP1P09467 338 aa6.86□□□□□ -1.31
RIF1-208ENST00000457745 FAM106CPP0CH98 169 aa6.86□□□□□ -1.31
RIF1-208ENST00000457745 SPP1P10451 314 aa6.86□□□□□ -1.31
RIF1-208ENST00000457745 CTRB1P17538 263 aa6.86□□□□□ -1.31
RIF1-208ENST00000457745 BRS3P32247 399 aa6.86□□□□□ -1.31
RIF1-208ENST00000457745 NUP62P37198 522 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms