RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TMEM178BH3BS89 294 aa14.99□□□□□ -0.01
SEMA3B-209ENST00000456560 J3QR06 171 aa14.99□□□□□ -0.01
SEMA3B-209ENST00000456560 CXorf1O96002 111 aa14.99□□□□□ -0.01
SEMA3B-209ENST00000456560 RPL29P47914 159 aaKnown RBP14.99□□□□□ -0.01
SEMA3B-209ENST00000456560 CST9LP1Q5W188 147 aa14.99□□□□□ -0.01
SEMA3B-209ENST00000456560 MRPL41Q8IXM3 137 aaKnown RBP14.99□□□□□ -0.01
SEMA3B-209ENST00000456560 NEUROG1Q92886 237 aa14.99□□□□□ -0.01
SEMA3B-209ENST00000456560 TXNDC17Q9BRA2 123 aa14.99□□□□□ -0.01
SEMA3B-209ENST00000456560 YLPM1P49750 1951 aaKnown RBP14.99□□□□□ -0.01
SEMA3B-209ENST00000456560 K7ENP7 123 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 RPL31P62899 125 aaKnown RBP14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 TMEM200BQ69YZ2 307 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 KCNIP4Q6PIL6 250 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 BEND2Q8NDZ0 799 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 HINT2Q9BX68 163 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 BET1LQ9NYM9 111 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 SH3BGRL2Q9UJC5 107 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 ZGRF1Q86YA3 2104 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 PPIAL4EA0A075B759 164 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 TEX50A0A1B0GTY4 177 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 PPIAL4DF5H284 164 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 PPIAL4FP0DN26 164 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 TGIF2LXQ8IUE1 241 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 STPG3Q8N7X2 389 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 PPIAL4AQ9Y536 164 aa14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 MAP1BP46821 2468 aaKnown RBP14.98□□□□□ -0.01
SEMA3B-209ENST00000456560 TYMSP04818 313 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 CCL3L1P16619 93 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 CHRNA7P36544 502 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 PRR20EP86478 221 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 PRR20CP86479 221 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 PRR20DP86480 221 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 PRR20BP86481 221 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 PRR20AP86496 221 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 EFNB3Q15768 340 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 TBR1Q16650 682 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 PRSS8Q16651 343 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 LINC01551Q86U37 167 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 SAP30LQ9HAJ7 183 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 PLEKHA3Q9HB20 300 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 RP1L1Q8IWN7 2480 aaPredicted RBP14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 NBEAQ8NFP9 2946 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 NDUFB4O95168 129 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 LINC00869P0C866 280 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 RAB31Q13636 194 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 ZNF714Q96N38 554 aa14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 MRPL20Q9BYC9 149 aaKnown RBP14.97□□□□□ -0.01
SEMA3B-209ENST00000456560 SAA1P0DJI8 122 aaPredicted RBP14.96□□□□□ -0.01
SEMA3B-209ENST00000456560 IGFBP2P18065 325 aa14.96□□□□□ -0.01
SEMA3B-209ENST00000456560 ATP5IP56385 69 aaPredicted RBP14.96□□□□□ -0.01
SEMA3B-209ENST00000456560 FAM78BQ5VT40 261 aa14.96□□□□□ -0.01
SEMA3B-209ENST00000456560 SPATA31B1PQ5VZV4 182 aa14.96□□□□□ -0.01
SEMA3B-209ENST00000456560 RND1Q92730 232 aa14.96□□□□□ -0.01
SEMA3B-209ENST00000456560 DERL1Q9BUN8 251 aa14.96□□□□□ -0.01
SEMA3B-209ENST00000456560 SEPSECSQ9HD40 501 aaKnown RBP14.96□□□□□ -0.01
SEMA3B-209ENST00000456560 FKBP11Q9NYL4 201 aa14.96□□□□□ -0.01
SEMA3B-209ENST00000456560 CNN1P51911 297 aaKnown RBP14.96□□□□□ -0.02
SEMA3B-209ENST00000456560 RHOBP62745 196 aa14.96□□□□□ -0.02
SEMA3B-209ENST00000456560 IQCJQ1A5X6 159 aa14.96□□□□□ -0.02
SEMA3B-209ENST00000456560 LYPD2Q6UXB3 125 aa14.96□□□□□ -0.02
SEMA3B-209ENST00000456560 OSR1Q8TAX0 266 aaPredicted RBP14.96□□□□□ -0.02
SEMA3B-209ENST00000456560 WFIKKN1Q96NZ8 548 aa14.96□□□□□ -0.02
SEMA3B-209ENST00000456560 TMEM106BQ9NUM4 274 aa14.96□□□□□ -0.02
SEMA3B-209ENST00000456560 SLC45A2Q9UMX9 530 aa14.96□□□□□ -0.02
SEMA3B-209ENST00000456560 H0YJW9 148 aa14.95□□□□□ -0.02
SEMA3B-209ENST00000456560 GCHFRP30047 84 aa14.95□□□□□ -0.02
SEMA3B-209ENST00000456560 ZNF124Q15973 351 aa14.95□□□□□ -0.02
SEMA3B-209ENST00000456560 C2orf83Q53S99 150 aa14.95□□□□□ -0.02
SEMA3B-209ENST00000456560 PRR30Q53SZ7 412 aaPredicted RBP14.95□□□□□ -0.02
SEMA3B-209ENST00000456560 GBGT1Q8N5D6 347 aa14.95□□□□□ -0.02
SEMA3B-209ENST00000456560 OR5AN1Q8NGI8 311 aa14.95□□□□□ -0.02
SEMA3B-209ENST00000456560 OR5B3Q8NH48 314 aa14.95□□□□□ -0.02
SEMA3B-209ENST00000456560 TCAPO15273 167 aa14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 CD99P14209 185 aa14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 TMEM177Q53S58 311 aa14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 ZNF596Q8TC21 504 aa14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 RNASE6Q93091 150 aaKnown RBP14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 YTHDF2Q9Y5A9 579 aaKnown RBP14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 VSTM5A8MXK1 200 aa14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 SHISA9B4DS77 424 aa14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 EREGO14944 169 aa14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 APOA2P02652 100 aa14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 IL3RAP26951 378 aa14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 LCN2P80188 198 aa14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 TMEM144Q7Z5S9 345 aa14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 CCL17Q92583 94 aa14.94□□□□□ -0.02
SEMA3B-209ENST00000456560 A0A0U1RQK1 487 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 ZNF320A2RRD8 509 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 SCGB1D1O95968 90 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 RNASE2P10153 161 aaKnown RBP14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 RAB4BP61018 213 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 LINC00311Q8N616 119 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 C8orf31Q8N9H6 132 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 ZNF114Q8NC26 417 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 OR1L8Q8NGR8 309 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 AURKAIP1Q9NWT8 199 aaPredicted RBP14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 TRAPPC1Q9Y5R8 145 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 E7EQL1 145 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 NDUFB3O43676 98 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 FOXH1O75593 365 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms