RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 LINC00869P0C866 280 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 MYOD1P15172 320 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 CA7P43166 264 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 MFAP2P55001 183 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 OCIAD2Q56VL3 154 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 ZC2HC1AQ96GY0 325 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 HES7Q9BYE0 225 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 TNFRSF19Q9NS68 423 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 ZNF355PQ9NSJ1 428 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 MRPL27Q9P0M9 148 aaKnown RBP8.48□□□□□ -1.05
CLIP4-208ENST00000456385 TCF19Q9Y242 345 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 IZUMO1RA6ND01 250 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 NUDT3O95989 172 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 FOLR3P41439 243 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 GPR12P47775 334 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 PRR20EP86478 221 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 PRR20CP86479 221 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 PRR20DP86480 221 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 PRR20BP86481 221 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 PRR20AP86496 221 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 COX19Q49B96 90 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 LRRC10Q5BKY1 277 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 OR52E5Q8NH55 327 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 IGF2BP2-AS1Q96M15 143 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 TMEM140Q9NV12 185 aa8.48□□□□□ -1.05
CLIP4-208ENST00000456385 URB1O60287 2271 aaKnown RBP8.47□□□□□ -1.05
CLIP4-208ENST00000456385 hDV102S1A0JD36 115 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 M0R1X1 148 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 CD24P25063 80 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 CYB561P49447 251 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 PPOXP50336 477 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 DUSP3P51452 185 aaPredicted RBP8.47□□□□□ -1.05
CLIP4-208ENST00000456385 RHOGP84095 191 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 IL11RAQ14626 422 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 AMMECR1LQ6DCA0 310 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 OR4A47Q6IF82 309 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 VHLLQ6RSH7 139 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 LINC00173Q6ZV60 143 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 NABP2Q9BQ15 211 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 LOXL2Q9Y4K0 774 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 PTPRBP23467 1997 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 IGKV1OR2-108A0A075B7D4 117 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 MUC21A0A0G2JKD1 596 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 MUC21A0A140T8X8 626 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 NPY1RP25929 384 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 CAMPP49913 170 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 BPIFB3P59826 476 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 EDDM3AQ14507 147 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 MUC21Q5SSG8 566 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 UTF1Q5T230 341 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 C1orf229Q6ZS94 237 aaPredicted RBP8.47□□□□□ -1.05
CLIP4-208ENST00000456385 ZNF596Q8TC21 504 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 URB1-AS1Q96HZ7 61 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 PLEKHA3Q9HB20 300 aa8.47□□□□□ -1.05
CLIP4-208ENST00000456385 SPENQ96T58 3664 aaKnown RBP8.46□□□□□ -1.05
CLIP4-208ENST00000456385 MUC3AQ02505 3323 aa8.46□□□□□ -1.05
CLIP4-208ENST00000456385 OR4C46A6NHA9 309 aa8.46□□□□□ -1.05
CLIP4-208ENST00000456385 MAGEA5P43359 124 aa8.46□□□□□ -1.05
CLIP4-208ENST00000456385 ZNF134P52741 427 aa8.46□□□□□ -1.05
CLIP4-208ENST00000456385 RAB31Q13636 194 aa8.46□□□□□ -1.05
CLIP4-208ENST00000456385 PPP1R32Q7Z5V6 425 aa8.46□□□□□ -1.05
CLIP4-208ENST00000456385 C11orf53Q8IXP5 236 aa8.46□□□□□ -1.05
CLIP4-208ENST00000456385 NUP35Q8NFH5 326 aa8.46□□□□□ -1.05
CLIP4-208ENST00000456385 OR2T6Q8NHC8 308 aa8.46□□□□□ -1.05
CLIP4-208ENST00000456385 MCRIP2Q9BUT9 160 aaKnown RBP8.46□□□□□ -1.05
CLIP4-208ENST00000456385 HINT2Q9BX68 163 aa8.46□□□□□ -1.05
CLIP4-208ENST00000456385 OBP2BQ9NPH6 170 aa8.46□□□□□ -1.05
CLIP4-208ENST00000456385 C15orf65H3BRN8 121 aa8.46□□□□□ -1.06
CLIP4-208ENST00000456385 SMPD2O60906 423 aa8.46□□□□□ -1.06
CLIP4-208ENST00000456385 SRFP11831 508 aa8.46□□□□□ -1.06
CLIP4-208ENST00000456385 ERVK-16P61578 105 aa8.46□□□□□ -1.06
CLIP4-208ENST00000456385 BVES-AS1Q5T3Y7 98 aa8.46□□□□□ -1.06
CLIP4-208ENST00000456385 NUDT10Q8NFP7 164 aa8.46□□□□□ -1.06
CLIP4-208ENST00000456385 SLC25A40Q8TBP6 338 aa8.46□□□□□ -1.06
CLIP4-208ENST00000456385 DUSP23Q9BVJ7 150 aa8.46□□□□□ -1.06
CLIP4-208ENST00000456385 TMEM167BQ9NRX6 74 aa8.46□□□□□ -1.06
CLIP4-208ENST00000456385 GNG12Q9UBI6 72 aa8.46□□□□□ -1.06
CLIP4-208ENST00000456385 ARL2-SNX15V9GYD0 113 aa8.46□□□□□ -1.06
CLIP4-208ENST00000456385 VWC2LB2RUY7 222 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 CORTO00230 105 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 MPV17P39210 176 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 MLANAQ16655 118 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 MORN5Q5VZ52 161 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 PRR27Q6MZM9 219 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 SMIM15Q7Z3B0 74 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 SAP25Q8TEE9 199 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 SNRNP40Q96DI7 357 aaKnown RBP8.45□□□□□ -1.06
CLIP4-208ENST00000456385 TMEM70Q9BUB7 260 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 SAP30LQ9HAJ7 183 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 SLC25A10Q9UBX3 287 aaPredicted RBP8.45□□□□□ -1.06
CLIP4-208ENST00000456385 SELENOKQ9Y6D0 94 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 PI4KAP42356 2102 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 TRAV5A0A0B4J249 113 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 FAM90A9PA6NNJ1 464 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 TBC1D28Q2M2D7 210 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 FAM120AOSQ5T036 256 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 TRAT1Q6PIZ9 186 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 ACP7Q6ZNF0 438 aa8.45□□□□□ -1.06
CLIP4-208ENST00000456385 BCL2L2Q92843 193 aaPredicted RBP8.45□□□□□ -1.06
CLIP4-208ENST00000456385 LEAP2Q969E1 77 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms