RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 SLC25A24Q6NUK1 477 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 SPSB3Q6PJ21 355 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 PLET1Q6UQ28 207 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 H2BFWTQ7Z2G1 175 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 TMEM61Q8N0U2 210 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 ZNF114Q8NC26 417 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 OR4D10Q8NGI6 311 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 OR1P1Q8NH06 330 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 MUC7Q8TAX7 377 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 RAB2BQ8WUD1 216 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 TMEM190Q8WZ59 177 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 MRGPRFQ96AM1 343 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 WDR89Q96FK6 387 aaPredicted RBP9.06□□□□□ -0.96
USP40-210ENST00000454354 SPATA25Q9BR10 227 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 TUBA4BQ9H853 241 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 PLEKHA3Q9HB20 300 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 CCDC59Q9P031 241 aaKnown RBP9.06□□□□□ -0.96
USP40-210ENST00000454354 MLXQ9UH92 298 aa9.06□□□□□ -0.96
USP40-210ENST00000454354 F8W735 103 aaPredicted RBP9.05□□□□□ -0.96
USP40-210ENST00000454354 CTDSP2O14595 271 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 CD7P09564 240 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 PGAM2P15259 253 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 TMBIM6P55061 237 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 PIGPP57054 158 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 TM4SF20Q53R12 229 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 CLVS1Q8IUQ0 354 aaPredicted RBP9.05□□□□□ -0.96
USP40-210ENST00000454354 OR2C3Q8N628 320 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 UXS1Q8NBZ7 420 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 OR4A16Q8NH70 328 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 TERB2Q8NHR7 220 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 DYNC2LI1Q8TCX1 351 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 SCARB1Q8WTV0 552 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 SMIM4Q8WVI0 70 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 TP53RKQ96S44 253 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 C21orf62Q9NYP8 219 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 MRPL27Q9P0M9 148 aaKnown RBP9.05□□□□□ -0.96
USP40-210ENST00000454354 RABL2AQ9UBK7 228 aaPredicted RBP9.05□□□□□ -0.96
USP40-210ENST00000454354 RABL2BQ9UNT1 228 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 UFC1Q9Y3C8 167 aa9.05□□□□□ -0.96
USP40-210ENST00000454354 TRAV25A0A0B4J276 109 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 OR2T8A6NH00 312 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 NDUFA4O00483 81 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 CTDSPLO15194 276 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 RGS5O15539 181 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 RAB3DO95716 219 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 IGKV1-5P01602 117 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 PI3P19957 117 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 ADMP35318 185 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 PPP5CP53041 499 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 HSPE1P61604 102 aaKnown RBP9.04□□□□□ -0.96
USP40-210ENST00000454354 GUCA2BQ16661 112 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 STEAP1BQ6NZ63 245 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 BTNL8Q6UX41 500 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 ZFAND1Q8TCF1 268 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 CHRDL1Q9BU40 450 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 EDA2RQ9HAV5 297 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 CEPT1Q9Y6K0 416 aa9.04□□□□□ -0.96
USP40-210ENST00000454354 IGHV3-35A0A0C4DH35 117 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 C3orf85A0A1B0GTC6 90 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 OR11H12B2RN74 326 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 INS-IGF2F8WCM5 200 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 I3L2K1 104 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 B3GALNT1O75752 331 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 CTSDP07339 412 aaPredicted RBP9.03□□□□□ -0.96
USP40-210ENST00000454354 UCP1P25874 307 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 FCGR2BP31994 310 aaPredicted RBP9.03□□□□□ -0.96
USP40-210ENST00000454354 MEF2DQ14814 521 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 CASC10Q5T4H9 136 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 SLC16A13Q7RTY0 426 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 DEFB125Q8N687 156 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 CCDC71LQ8N9Z2 235 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 OR13C8Q8NGS7 320 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 ZNF414Q96IQ9 312 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 WFDC10AQ9H1F0 79 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 SRD5A3Q9H8P0 318 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 DAZ1Q9NQZ3 744 aaKnown RBP9.03□□□□□ -0.96
USP40-210ENST00000454354 GAR1Q9NY12 217 aaKnown RBP9.03□□□□□ -0.96
USP40-210ENST00000454354 COPZ2Q9P299 210 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 RYR2Q92736 4967 aa9.03□□□□□ -0.96
USP40-210ENST00000454354 IGHV3-21A0A0B4J1V1 117 aa9.02□□□□□ -0.97
USP40-210ENST00000454354 RBMY1BA6NDE4 496 aaKnown RBP9.02□□□□□ -0.97
USP40-210ENST00000454354 RBMY1EA6NEQ0 496 aaKnown RBP9.02□□□□□ -0.97
USP40-210ENST00000454354 K7EMT4 169 aa9.02□□□□□ -0.97
USP40-210ENST00000454354 ATG12O94817 140 aa9.02□□□□□ -0.97
USP40-210ENST00000454354 CTSGP08311 255 aa9.02□□□□□ -0.97
USP40-210ENST00000454354 RBMY1DP0C7P1 496 aaKnown RBP9.02□□□□□ -0.97
USP40-210ENST00000454354 RPL5P46777 297 aaKnown RBP9.02□□□□□ -0.97
USP40-210ENST00000454354 SURF2Q15527 256 aaPredicted RBP9.02□□□□□ -0.97
USP40-210ENST00000454354 ANKRD55Q3KP44 614 aa9.02□□□□□ -0.97
USP40-210ENST00000454354 SCGB2B2Q4G0G5 96 aa9.02□□□□□ -0.97
USP40-210ENST00000454354 MARCH1Q8TCQ1 289 aa9.02□□□□□ -0.97
USP40-210ENST00000454354 TXN2Q99757 166 aa9.02□□□□□ -0.97
USP40-210ENST00000454354 C5orf66Q9H5L9 145 aa9.02□□□□□ -0.97
USP40-210ENST00000454354 SELENOKQ9Y6D0 94 aa9.02□□□□□ -0.97
USP40-210ENST00000454354 SACSQ9NZJ4 4579 aa9.02□□□□□ -0.97
USP40-210ENST00000454354 A0A0B4J293 547 aa9.01□□□□□ -0.97
USP40-210ENST00000454354 H3BMQ9 156 aa9.01□□□□□ -0.97
USP40-210ENST00000454354 SCAF4O95104 1147 aaKnown RBP9.01□□□□□ -0.97
USP40-210ENST00000454354 AKR1C2P52895 323 aa9.01□□□□□ -0.97
USP40-210ENST00000454354 IL18Q14116 193 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms