RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), human

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D4-208	ENST00000454350	OR5B3	Q8NH48	314 aa		13.77	□□□□□ -0.21
UBE2D4-208	ENST00000454350	HINT2	Q9BX68	163 aa		13.77	□□□□□ -0.21
UBE2D4-208	ENST00000454350	SCPEP1	Q9HB40	452 aa		13.77	□□□□□ -0.21
UBE2D4-208	ENST00000454350	PRND	Q9UKY0	176 aa		13.77	□□□□□ -0.21
UBE2D4-208	ENST00000454350	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.76	□□□□□ -0.21
UBE2D4-208	ENST00000454350	NDUFA4	O00483	81 aa		13.76	□□□□□ -0.21
UBE2D4-208	ENST00000454350	TSPAN4	O14817	238 aa		13.76	□□□□□ -0.21
UBE2D4-208	ENST00000454350	CYB5B	O43169	146 aa		13.76	□□□□□ -0.21
UBE2D4-208	ENST00000454350	SNAPC5	O75971	98 aa		13.76	□□□□□ -0.21
UBE2D4-208	ENST00000454350	CTSG	P08311	255 aa		13.76	□□□□□ -0.21
UBE2D4-208	ENST00000454350	UCP3	P55916	312 aa		13.76	□□□□□ -0.21
UBE2D4-208	ENST00000454350	TBC1D26	Q86UD7	250 aa		13.76	□□□□□ -0.21
UBE2D4-208	ENST00000454350	SNX29P2	Q8IUI4	249 aa		13.76	□□□□□ -0.21
UBE2D4-208	ENST00000454350	SPAG8	Q99932	426 aa	Predicted RBP	13.76	□□□□□ -0.21
UBE2D4-208	ENST00000454350	VCX3A	Q9NNX9	186 aa		13.76	□□□□□ -0.21
UBE2D4-208	ENST00000454350	DAZ1	Q9NQZ3	744 aa	Known RBP	13.76	□□□□□ -0.21
UBE2D4-208	ENST00000454350		K7EMT4	169 aa		13.75	□□□□□ -0.21
UBE2D4-208	ENST00000454350	HPGDS	O60760	199 aa		13.75	□□□□□ -0.21
UBE2D4-208	ENST00000454350	ODF3L2	Q3SX64	289 aa		13.75	□□□□□ -0.21
UBE2D4-208	ENST00000454350	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.75	□□□□□ -0.21
UBE2D4-208	ENST00000454350	OR2C3	Q8N628	320 aa		13.75	□□□□□ -0.21
UBE2D4-208	ENST00000454350	OR1P1	Q8NH06	330 aa		13.75	□□□□□ -0.21
UBE2D4-208	ENST00000454350	IL17D	Q8TAD2	202 aa		13.75	□□□□□ -0.21
UBE2D4-208	ENST00000454350	IGHV3OR16-8	A0A075B7F1	116 aa		13.74	□□□□□ -0.21
UBE2D4-208	ENST00000454350		I3L2K1	104 aa		13.74	□□□□□ -0.21
UBE2D4-208	ENST00000454350	RCVRN	P35243	200 aa		13.74	□□□□□ -0.21
UBE2D4-208	ENST00000454350	TSPAN5	P62079	268 aa		13.74	□□□□□ -0.21
UBE2D4-208	ENST00000454350	LPCAT3	Q6P1A2	487 aa		13.74	□□□□□ -0.21
UBE2D4-208	ENST00000454350	TMEM56	Q96MV1	263 aa		13.74	□□□□□ -0.21
UBE2D4-208	ENST00000454350	FKBP11	Q9NYL4	201 aa		13.74	□□□□□ -0.21
UBE2D4-208	ENST00000454350	ZNF207	O43670	478 aa	Known RBP	13.73	□□□□□ -0.21
UBE2D4-208	ENST00000454350	LHFPL1	Q86WI0	220 aa		13.73	□□□□□ -0.21
UBE2D4-208	ENST00000454350	SLC38A6	Q8IZM9	456 aa		13.73	□□□□□ -0.21
UBE2D4-208	ENST00000454350	ZNF114	Q8NC26	417 aa		13.73	□□□□□ -0.21
UBE2D4-208	ENST00000454350	TSC22D3	Q99576	134 aa		13.73	□□□□□ -0.21
UBE2D4-208	ENST00000454350	NAA50	Q9GZZ1	169 aa	Known RBP	13.73	□□□□□ -0.21
UBE2D4-208	ENST00000454350	UBQLN2	Q9UHD9	624 aa		13.73	□□□□□ -0.21
UBE2D4-208	ENST00000454350	BIRC6	Q9NR09	4857 aa		13.72	□□□□□ -0.21
UBE2D4-208	ENST00000454350	SMIM31	A0A1B0GVY4	71 aa		13.72	□□□□□ -0.21
UBE2D4-208	ENST00000454350	C15orf62	A8K5M9	175 aa		13.72	□□□□□ -0.21
UBE2D4-208	ENST00000454350		M0QYG6	137 aa		13.72	□□□□□ -0.21
UBE2D4-208	ENST00000454350		P0C879	139 aa		13.72	□□□□□ -0.21
UBE2D4-208	ENST00000454350	FCGR2B	P31994	310 aa	Predicted RBP	13.72	□□□□□ -0.21
UBE2D4-208	ENST00000454350	PRCD	Q00LT1	54 aa		13.72	□□□□□ -0.21
UBE2D4-208	ENST00000454350	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
UBE2D4-208	ENST00000454350	CTF1	Q16619	201 aa		13.72	□□□□□ -0.21
UBE2D4-208	ENST00000454350	WFDC3	Q8IUB2	231 aa		13.72	□□□□□ -0.21
UBE2D4-208	ENST00000454350	UBAC2	Q8NBM4	344 aa		13.72	□□□□□ -0.21
UBE2D4-208	ENST00000454350	MRGPRF	Q96AM1	343 aa		13.72	□□□□□ -0.21
UBE2D4-208	ENST00000454350	RND3	P61587	244 aa		13.71	□□□□□ -0.21
UBE2D4-208	ENST00000454350	IZUMO4	Q1ZYL8	232 aa		13.71	□□□□□ -0.21
UBE2D4-208	ENST00000454350		Q56UQ5	140 aa		13.71	□□□□□ -0.21
UBE2D4-208	ENST00000454350	H2BFWT	Q7Z2G1	175 aa		13.71	□□□□□ -0.21
UBE2D4-208	ENST00000454350	OR10C1	Q96KK4	312 aa		13.71	□□□□□ -0.21
UBE2D4-208	ENST00000454350	C20orf24	Q9BUV8	137 aa		13.71	□□□□□ -0.21
UBE2D4-208	ENST00000454350	KLK11	Q9UBX7	282 aa		13.71	□□□□□ -0.21
UBE2D4-208	ENST00000454350	SMPX	Q9UHP9	88 aa		13.71	□□□□□ -0.21
UBE2D4-208	ENST00000454350	IGKV1-5	P01602	117 aa		13.7	□□□□□ -0.22
UBE2D4-208	ENST00000454350	CTSD	P07339	412 aa	Predicted RBP	13.7	□□□□□ -0.22
UBE2D4-208	ENST00000454350	SMIM18	P0DKX4	95 aa		13.7	□□□□□ -0.22
UBE2D4-208	ENST00000454350	RORC	P51449	518 aa		13.7	□□□□□ -0.22
UBE2D4-208	ENST00000454350	HSPE1	P61604	102 aa	Known RBP	13.7	□□□□□ -0.22
UBE2D4-208	ENST00000454350		Q6ZWC4	215 aa		13.7	□□□□□ -0.22
UBE2D4-208	ENST00000454350	RNF2	Q99496	336 aa		13.7	□□□□□ -0.22
UBE2D4-208	ENST00000454350	TP53TG1	Q9Y2A0	90 aa		13.7	□□□□□ -0.22
UBE2D4-208	ENST00000454350	CHEK1	O14757	476 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	GABARAP	O95166	117 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	MT-CO2	P00403	227 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	IGHV3-48	P01763	117 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	PI3	P19957	117 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	S100G	P29377	79 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	FAM90A2P	Q658T7	463 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	PVRIG	Q6DKI7	326 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	LAMTOR1	Q6IAA8	161 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	OR52I2	Q8NH67	350 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	OR4A16	Q8NH70	328 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	MISP3	Q96FF7	219 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	TP53RK	Q96S44	253 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	TXN2	Q99757	166 aa		13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350	NXF2	Q9GZY0	626 aa	Known RBP	13.69	□□□□□ -0.22
UBE2D4-208	ENST00000454350		A0A0B4J293	547 aa		13.68	□□□□□ -0.22
UBE2D4-208	ENST00000454350	IGHV7-4-1	A0A0J9YVY3	117 aa		13.68	□□□□□ -0.22
UBE2D4-208	ENST00000454350	JTB	O76095	146 aa		13.68	□□□□□ -0.22
UBE2D4-208	ENST00000454350	CD3D	P04234	171 aa		13.68	□□□□□ -0.22
UBE2D4-208	ENST00000454350	MFAP4	P55083	255 aa		13.68	□□□□□ -0.22
UBE2D4-208	ENST00000454350	RNASE12	Q5GAN4	147 aa	Known RBP	13.68	□□□□□ -0.22
UBE2D4-208	ENST00000454350	ABHD1	Q96SE0	405 aa		13.68	□□□□□ -0.22
UBE2D4-208	ENST00000454350	RHPN1-AS1	Q9BWJ2	59 aa		13.68	□□□□□ -0.22
UBE2D4-208	ENST00000454350	MTFP1	Q9UDX5	166 aa		13.68	□□□□□ -0.22
UBE2D4-208	ENST00000454350	AGRN	O00468	2067 aa		13.68	□□□□□ -0.22
UBE2D4-208	ENST00000454350	KIR2DL5B	A0A0G2JN68	375 aa		13.67	□□□□□ -0.22
UBE2D4-208	ENST00000454350	KIR2DL5B	A0A0G2JPC4	375 aa		13.67	□□□□□ -0.22
UBE2D4-208	ENST00000454350		A0A0J9YWU9	116 aa		13.67	□□□□□ -0.22
UBE2D4-208	ENST00000454350	SPRY2	O43597	315 aa		13.67	□□□□□ -0.22
UBE2D4-208	ENST00000454350	TNFRSF9	Q07011	255 aa		13.67	□□□□□ -0.22
UBE2D4-208	ENST00000454350	DEFB135	Q30KP9	77 aa		13.67	□□□□□ -0.22
UBE2D4-208	ENST00000454350	SPINK9	Q5DT21	86 aa		13.67	□□□□□ -0.22
UBE2D4-208	ENST00000454350	KIR2DL5A	Q8N109	375 aa		13.67	□□□□□ -0.22
UBE2D4-208	ENST00000454350	OR4D10	Q8NGI6	311 aa		13.67	□□□□□ -0.22
UBE2D4-208	ENST00000454350	KIR2DL5B	Q8NHK3	375 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms