RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 IGHV3-43A0A0B4J1X8 118 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 PPIAL4CA0A0B4J2A2 164 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 VWC2LB2RUY7 222 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 M0R143 59 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 LIPFP07098 398 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 PPIAL4GP0DN37 164 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 IGHV3-43DP0DP04 118 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 SLC38A11Q08AI6 406 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 SSX7Q7RTT5 188 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 FAM216AQ8WUB2 273 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 MBD6Q96DN6 1003 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 TMEM147Q9BVK8 224 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 VSIRQ9H7M9 311 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 CACNG5Q9UF02 275 aa12.95□□□□□ -0.34
SNX17-204ENST00000453453 PTPN13Q12923 2485 aa12.94□□□□□ -0.34
SNX17-204ENST00000453453 YPEL1O60688 119 aa12.94□□□□□ -0.34
SNX17-204ENST00000453453 CCL3L1P16619 93 aa12.94□□□□□ -0.34
SNX17-204ENST00000453453 PRAMEF5Q5TYX0 476 aa12.94□□□□□ -0.34
SNX17-204ENST00000453453 YPEL2Q96QA6 119 aa12.94□□□□□ -0.34
SNX17-204ENST00000453453 OR4C12Q96R67 309 aa12.94□□□□□ -0.34
SNX17-204ENST00000453453 PARLQ9H300 379 aa12.94□□□□□ -0.34
SNX17-204ENST00000453453 BAHCC1Q9P281 2608 aa12.93□□□□□ -0.34
SNX17-204ENST00000453453 TRAV9-1A0A075B6T8 112 aa12.93□□□□□ -0.34
SNX17-204ENST00000453453 IGHV4-30-2A0A087WSY4 118 aa12.93□□□□□ -0.34
SNX17-204ENST00000453453 H3BP45 60 aa12.93□□□□□ -0.34
SNX17-204ENST00000453453 CNN1P51911 297 aaKnown RBP12.93□□□□□ -0.34
SNX17-204ENST00000453453 FGF8P55075 233 aaPredicted RBP12.93□□□□□ -0.34
SNX17-204ENST00000453453 LMO4P61968 165 aa12.93□□□□□ -0.34
SNX17-204ENST00000453453 TNFRSF9Q07011 255 aa12.93□□□□□ -0.34
SNX17-204ENST00000453453 ARL16Q0P5N6 197 aa12.93□□□□□ -0.34
SNX17-204ENST00000453453 MSMO1Q15800 293 aa12.93□□□□□ -0.34
SNX17-204ENST00000453453 TXNDC17Q9BRA2 123 aa12.93□□□□□ -0.34
SNX17-204ENST00000453453 KCNS2Q9ULS6 477 aa12.93□□□□□ -0.34
SNX17-204ENST00000453453 CENPEQ02224 2701 aa12.93□□□□□ -0.34
SNX17-204ENST00000453453 CRYBG3Q68DQ2 2970 aa12.93□□□□□ -0.34
SNX17-204ENST00000453453 MALRD1Q5VYJ5 2156 aa12.92□□□□□ -0.34
SNX17-204ENST00000453453 ENSAO43768 121 aaKnown RBP12.92□□□□□ -0.34
SNX17-204ENST00000453453 FOXH1O75593 365 aa12.92□□□□□ -0.34
SNX17-204ENST00000453453 IGKV1-39P01597 117 aa12.92□□□□□ -0.34
SNX17-204ENST00000453453 RBP4P02753 201 aa12.92□□□□□ -0.34
SNX17-204ENST00000453453 IGKV1D-39P04432 117 aa12.92□□□□□ -0.34
SNX17-204ENST00000453453 OR10J1P30954 320 aa12.92□□□□□ -0.34
SNX17-204ENST00000453453 LOXL3P58215 753 aa12.92□□□□□ -0.34
SNX17-204ENST00000453453 MORN2Q502X0 79 aa12.92□□□□□ -0.34
SNX17-204ENST00000453453 ZBTB34Q8NCN2 500 aa12.92□□□□□ -0.34
SNX17-204ENST00000453453 LY6G5BQ8NDX9 201 aa12.92□□□□□ -0.34
SNX17-204ENST00000453453 ONECUT1Q9UBC0 465 aa12.92□□□□□ -0.34
SNX17-204ENST00000453453 ZNF705GA8MUZ8 300 aaPredicted RBP12.91□□□□□ -0.34
SNX17-204ENST00000453453 C22orf46C9J442 243 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 IGKV1-5P01602 117 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 RAB7AP51149 207 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 DLX6P56179 175 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 RELQ04864 619 aaPredicted RBP12.91□□□□□ -0.34
SNX17-204ENST00000453453 GAGE1Q13065 139 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 Q6ZRM9 215 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 MRPL41Q8IXM3 137 aaKnown RBP12.91□□□□□ -0.34
SNX17-204ENST00000453453 RPP25LQ8N5L8 163 aaKnown RBP12.91□□□□□ -0.34
SNX17-204ENST00000453453 PCGF1Q9BSM1 259 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 FKBP11Q9NYL4 201 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 IGHV4-61A0A0C4DH41 118 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 C17orf98A8MV24 154 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 F6UZH7 168 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 ITGB1BP1O14713 200 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 EREGO14944 169 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 PDE6DO43924 150 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 IAPPP10997 89 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 VWC2Q2TAL6 325 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 TMEM144Q7Z5S9 345 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 TCTEX1D1Q8N7M0 179 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 PSG11Q9UQ72 335 aa12.91□□□□□ -0.34
SNX17-204ENST00000453453 ABCA12Q86UK0 2595 aa12.9□□□□□ -0.34
SNX17-204ENST00000453453 M0R1W7 72 aa12.9□□□□□ -0.34
SNX17-204ENST00000453453 NXPH3O95157 252 aa12.9□□□□□ -0.34
SNX17-204ENST00000453453 SNRPCP09234 159 aaKnown RBP12.9□□□□□ -0.34
SNX17-204ENST00000453453 IGHV1-8P0DP01 117 aa12.9□□□□□ -0.34
SNX17-204ENST00000453453 USF1P22415 310 aaPredicted RBP12.9□□□□□ -0.34
SNX17-204ENST00000453453 RPL15P61313 204 aaKnown RBP12.9□□□□□ -0.34
SNX17-204ENST00000453453 RANP62826 216 aaKnown RBP12.9□□□□□ -0.34
SNX17-204ENST00000453453 FOXL1Q12952 345 aa12.9□□□□□ -0.34
SNX17-204ENST00000453453 Q5PR19 223 aa12.9□□□□□ -0.34
SNX17-204ENST00000453453 OR51H1Q8NH63 302 aa12.9□□□□□ -0.34
SNX17-204ENST00000453453 RPUSD4Q96CM3 377 aaKnown RBP12.9□□□□□ -0.34
SNX17-204ENST00000453453 OR2D2Q9H210 308 aa12.9□□□□□ -0.34
SNX17-204ENST00000453453 FUT9Q9Y231 359 aa12.9□□□□□ -0.34
SNX17-204ENST00000453453 UBE2L5PA0A1B0GUS4 154 aa12.89□□□□□ -0.35
SNX17-204ENST00000453453 A0A1W2PPQ1 181 aa12.89□□□□□ -0.35
SNX17-204ENST00000453453 C17orf112F2Z3M2 114 aa12.89□□□□□ -0.35
SNX17-204ENST00000453453 TNFSF12O43508 249 aa12.89□□□□□ -0.35
SNX17-204ENST00000453453 MMP23AO75900 390 aa12.89□□□□□ -0.35
SNX17-204ENST00000453453 ELLP55199 621 aaPredicted RBP12.89□□□□□ -0.35
SNX17-204ENST00000453453 PRSS57Q6UWY2 283 aa12.89□□□□□ -0.35
SNX17-204ENST00000453453 KIR3DL3Q8N743 410 aa12.89□□□□□ -0.35
SNX17-204ENST00000453453 ZNF645Q8N7E2 425 aa12.89□□□□□ -0.35
SNX17-204ENST00000453453 CIB3Q96Q77 187 aaPredicted RBP12.89□□□□□ -0.35
SNX17-204ENST00000453453 SNHG12Q9BXW3 62 aa12.89□□□□□ -0.35
SNX17-204ENST00000453453 NAGKQ9UJ70 344 aa12.89□□□□□ -0.35
SNX17-204ENST00000453453 TACC2O95359 2948 aa12.89□□□□□ -0.35
SNX17-204ENST00000453453 ESDP10768 282 aa12.88□□□□□ -0.35
SNX17-204ENST00000453453 MDKP21741 143 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms