RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 DEFA4P12838 97 aa12.17□□□□□ -0.46
RBM39-219ENST00000453310 HOXA1P49639 335 aaPredicted RBP12.17□□□□□ -0.46
RBM39-219ENST00000453310 RHOGP84095 191 aa12.17□□□□□ -0.46
RBM39-219ENST00000453310 PDLIM3Q53GG5 364 aaPredicted RBP12.17□□□□□ -0.46
RBM39-219ENST00000453310 C8orf86Q6ZUL3 223 aa12.17□□□□□ -0.46
RBM39-219ENST00000453310 OR2C3Q8N628 320 aa12.17□□□□□ -0.46
RBM39-219ENST00000453310 OR1S1Q8NH92 325 aa12.17□□□□□ -0.46
RBM39-219ENST00000453310 C4orf3Q8WVX3 66 aa12.17□□□□□ -0.46
RBM39-219ENST00000453310 FANCD2OSQ96PS1 177 aa12.17□□□□□ -0.46
RBM39-219ENST00000453310 CACFD1Q9UGQ2 172 aa12.17□□□□□ -0.46
RBM39-219ENST00000453310 A0A0G2JLM5 398 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 FAM223BA6NKX1 122 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 INS-IGF2F8WCM5 200 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 PRAF2O60831 178 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 PITX3O75364 302 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 OR2J3O76001 311 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 IFNA21P01568 189 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 ERHP84090 104 aaKnown RBP12.16□□□□□ -0.46
RBM39-219ENST00000453310 FAM223AQ8IWN6 122 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 C12orf45Q8N5I9 185 aaPredicted RBP12.16□□□□□ -0.46
RBM39-219ENST00000453310 NECAP1Q8NC96 275 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 OR4F17Q8NGA8 305 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 USMG5Q96IX5 58 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 OR5B12Q96R08 314 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 OR4F4Q96R69 305 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 GPN1Q9HCN4 374 aaPredicted RBP12.16□□□□□ -0.46
RBM39-219ENST00000453310 ENY2Q9NPA8 101 aa12.16□□□□□ -0.46
RBM39-219ENST00000453310 F11RQ9Y624 299 aaKnown RBP12.16□□□□□ -0.46
RBM39-219ENST00000453310 IGLV11-55A0A075B6I3 123 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 C13orf42A0A1B0GVH6 325 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 MPTX1A8MV57 137 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 CYB5BO43169 146 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 IGHV3-11P01762 117 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 LGALS1P09382 135 aaKnown RBP12.15□□□□□ -0.46
RBM39-219ENST00000453310 HIST1H1BP16401 226 aaKnown RBP12.15□□□□□ -0.46
RBM39-219ENST00000453310 TNFRSF9Q07011 255 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 KLK9Q2XQG4 91 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 DEFB136Q30KP8 78 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 UXS1Q8NBZ7 420 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 ZNF114Q8NC26 417 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 P2RX4Q99571 388 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 HSPB7Q9UBY9 170 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 FBXL7Q9UJT9 491 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 KLK9Q9UKQ9 250 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 DMRT1Q9Y5R6 373 aa12.15□□□□□ -0.46
RBM39-219ENST00000453310 CEBPZOSA8MTT3 80 aa12.14□□□□□ -0.47
RBM39-219ENST00000453310 SNRPGP15A8MWD9 76 aa12.14□□□□□ -0.47
RBM39-219ENST00000453310 I3L521 148 aa12.14□□□□□ -0.47
RBM39-219ENST00000453310 MFAP2P55001 183 aa12.14□□□□□ -0.47
RBM39-219ENST00000453310 RUNX1Q01196 453 aa12.14□□□□□ -0.47
RBM39-219ENST00000453310 RGS21Q2M5E4 152 aa12.14□□□□□ -0.47
RBM39-219ENST00000453310 C15orf32Q32M92 178 aa12.14□□□□□ -0.47
RBM39-219ENST00000453310 OR1P1Q8NH06 330 aa12.14□□□□□ -0.47
RBM39-219ENST00000453310 CMYA5Q8N3K9 4069 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 WNK1Q9H4A3 2382 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 FAM90A26D6RGX4 464 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 CCSO14618 274 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 NDUFB8O95169 186 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 PF4P02776 101 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 ATP5G2Q06055 141 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 EXOSC2Q13868 293 aaKnown RBP12.13□□□□□ -0.47
RBM39-219ENST00000453310 PRR31Q5SQ13 230 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 SLC25A24Q6NUK1 477 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 ETV3LQ6ZN32 361 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 OR1L6Q8NGR2 347 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 RAX2Q96IS3 184 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 DUX3Q96PT4 197 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 THYN1Q9P016 225 aa12.13□□□□□ -0.47
RBM39-219ENST00000453310 CCL24O00175 119 aa12.12□□□□□ -0.47
RBM39-219ENST00000453310 SNCAP37840 140 aa12.12□□□□□ -0.47
RBM39-219ENST00000453310 IAH1Q2TAA2 248 aaPredicted RBP12.12□□□□□ -0.47
RBM39-219ENST00000453310 C11orf87Q6NUJ2 197 aa12.12□□□□□ -0.47
RBM39-219ENST00000453310 ZNF343Q6P1L6 599 aa12.12□□□□□ -0.47
RBM39-219ENST00000453310 DTD1Q8TEA8 209 aa12.12□□□□□ -0.47
RBM39-219ENST00000453310 OR10C1Q96KK4 312 aa12.12□□□□□ -0.47
RBM39-219ENST00000453310 RBKSQ9H477 322 aa12.12□□□□□ -0.47
RBM39-219ENST00000453310 HEYLQ9NQ87 328 aaPredicted RBP12.12□□□□□ -0.47
RBM39-219ENST00000453310 VWFP04275 2813 aa12.11□□□□□ -0.47
RBM39-219ENST00000453310 RNASE2P10153 161 aaKnown RBP12.11□□□□□ -0.47
RBM39-219ENST00000453310 MYCNOSP40205 109 aa12.11□□□□□ -0.47
RBM39-219ENST00000453310 SUB1P53999 127 aaKnown RBP eCLIP12.11□□□□□ -0.47
RBM39-219ENST00000453310 TATDN3Q17R31 274 aa12.11□□□□□ -0.47
RBM39-219ENST00000453310 BSXQ3C1V8 233 aa12.11□□□□□ -0.47
RBM39-219ENST00000453310 ZBTB8BQ8NAP8 495 aaPredicted RBP12.11□□□□□ -0.47
RBM39-219ENST00000453310 OR11H1Q8NG94 326 aa12.11□□□□□ -0.47
RBM39-219ENST00000453310 OR4D5Q8NGN0 318 aa12.11□□□□□ -0.47
RBM39-219ENST00000453310 HIPK2Q9H2X6 1198 aa12.11□□□□□ -0.47
RBM39-219ENST00000453310 IGHV4OR15-8A0A075B7B6 117 aa12.1□□□□□ -0.47
RBM39-219ENST00000453310 A0A087WW49 117 aa12.1□□□□□ -0.47
RBM39-219ENST00000453310 ANKRD34BA5PLL1 514 aa12.1□□□□□ -0.47
RBM39-219ENST00000453310 MFSD2BA6NFX1 497 aa12.1□□□□□ -0.47
RBM39-219ENST00000453310 FAM25EA8MYX2 175 aa12.1□□□□□ -0.47
RBM39-219ENST00000453310 MED6O75586 246 aa12.1□□□□□ -0.47
RBM39-219ENST00000453310 IGHV3-23P01764 117 aa12.1□□□□□ -0.47
RBM39-219ENST00000453310 HSPB1P04792 205 aaKnown RBP12.1□□□□□ -0.47
RBM39-219ENST00000453310 HTR2BP41595 481 aa12.1□□□□□ -0.47
RBM39-219ENST00000453310 ZNF616Q08AN1 781 aa12.1□□□□□ -0.47
RBM39-219ENST00000453310 FHL3Q13643 280 aa12.1□□□□□ -0.47
RBM39-219ENST00000453310 SLC24A4Q8NFF2 622 aa12.1□□□□□ -0.47
RBM39-219ENST00000453310 OR1N2Q8NGR9 330 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms