RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 IGLV1-50A0A075B6I6 118 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGKV2D-30A0A075B6S6 120 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGHV3-72A0A0B4J1Y9 119 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGHV3-66A0A0C4DH42 116 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGKV1-6A0A0C4DH72 117 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 ODAMA1E959 279 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 C9JCJ5 164 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZNF670-ZNF695F2Z2N8 137 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 NCR2O95944 276 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 NAPSAO96009 420 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGLV1-44P01699 117 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 AMBPP02760 352 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZNF688P0C7X2 276 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZNF823P16415 610 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 ATP6V0CP27449 155 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 TMBIM6P55061 237 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 NANOS2P60321 138 aaKnown RBP3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 RPL30P62888 115 aaKnown RBP3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 CDK6Q00534 326 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 HES1Q14469 280 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 LINC00305Q7Z4B0 112 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 TRAPPC6BQ86SZ2 158 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 NR2C2APQ86WQ0 139 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 H1FOOQ8IZA3 346 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 C4orf33Q8N1A6 199 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 TMEM256Q8N2U0 113 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 C11orf42Q8N5U0 333 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 C20orf203Q8NBC4 194 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 OR10G2Q8NGC3 310 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 OR5H6Q8NGV6 325 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 BRK1Q8WUW1 75 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 PP6455Q8WZ26 134 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 MAL2Q969L2 176 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZC2HC1AQ96GY0 325 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 PYGO2Q9BRQ0 406 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 HDHD3Q9BSH5 251 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 Q9H521 79 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZNF286AQ9HBT8 521 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 MARCOQ9UEW3 520 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 TP73-AS1Q9UF72 201 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 MYH11P35749 1972 aa3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 PRG4Q92954 1404 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P21-201ENST00000452483 NUP210Q8TEM1 1887 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGKV1D-43A0A0B4J1Z2 117 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGKV1-12A0A0C4DH73 117 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 A8MWL6 223 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGKV1-5P01602 117 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGKV1D-12P01611 117 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZNF728P0DKX0 622 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 HIST1H1BP16401 226 aaKnown RBP3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZNF32P17041 273 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 SRP14P37108 136 aaKnown RBP3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZNF80P51504 273 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 FGF12P61328 243 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 CCL20P78556 96 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZNF141Q15928 474 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 SP6Q3SY56 376 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 HSD17B12Q53GQ0 312 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 MEIG1Q5JSS6 88 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 COL5A1-AS1Q5SY13 56 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 AADACL3Q5VUY0 350 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 CGB2Q6NT52 195 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 MORN3Q6PF18 240 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 SSX8Q7RTT4 187 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 MSRB3Q8IXL7 192 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 RPP25LQ8N5L8 163 aaKnown RBP3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 TEX29Q8N6K0 151 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 DCANP1Q8TF63 244 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZNF799Q96GE5 643 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 TBL1YQ9BQ87 522 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 MRPL57Q9BQC6 102 aaKnown RBP3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 NAA38Q9BRA0 125 aaKnown RBP3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 C1QTNF6Q9BXI9 259 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 KRTAP1-5Q9BYS1 174 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 TMEM191AQ9H0A3 160 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 RERGLQ9H628 205 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 RNF122Q9H9V4 155 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 MYH7P12883 1935 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 GRIN2AQ12879 1464 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 TCOF1Q13428 1488 aaKnown RBP3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 ABCC10Q5T3U5 1492 aa3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 BAZ1BQ9UIG0 1483 aaKnown RBP3.16□□□□□ -1.9
HMGB3P21-201ENST00000452483 RAI1Q7Z5J4 1906 aaPredicted RBP3.15□□□□□ -1.9
HMGB3P21-201ENST00000452483 TMEM2Q9UHN6 1383 aa3.15□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGHV3-49A0A0A0MS15 119 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGHV1-58A0A0C4DH39 117 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGHV7-4-1A0A0J9YVY3 117 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 TRBV7-6A0A0J9YX20 115 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 SPAARA0A1B0GVQ0 90 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 A0A1B0GW54 56 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF860A6NHJ4 632 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 IFITM10A6NMD0 228 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 LY6LH3BQJ8 138 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 M0R378 163 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 BMPR1BO00238 502 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 LY6G6DO95868 133 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGHV3-13P01766 116 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 PRM2P04554 102 aa3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 HSPB1P04792 205 aaKnown RBP3.15□□□□□ -1.91
HMGB3P21-201ENST00000452483 HLA-EP13747 358 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms