RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 BRI3O95415 125 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 SFT2D2O95562 160 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 KRASP01116 189 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 IL6RP08887 468 aaPredicted RBP6.93□□□□□ -1.3
COL8A1-203ENST00000452013 TPT1P13693 172 aaKnown RBP6.93□□□□□ -1.3
COL8A1-203ENST00000452013 RPL27AP46776 148 aaKnown RBP6.93□□□□□ -1.3
COL8A1-203ENST00000452013 PIGPP57054 158 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 MRGPRG-AS1Q2M3A8 158 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 ZNF585BQ52M93 769 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 LCNL1Q6ZST4 164 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 WFDC9Q8NEX5 89 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 LHFPL5Q8TAF8 219 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 MARCH1Q8TCQ1 289 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 PPP1R1CQ8WVI7 109 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 MS4A10Q96PG2 267 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 COMMD5Q9GZQ3 224 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 FKBP11Q9NYL4 201 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 KCNIP3Q9Y2W7 256 aa6.93□□□□□ -1.3
COL8A1-203ENST00000452013 C3orf85A0A1B0GTC6 90 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 MARCH11A6NNE9 402 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 CCL24O00175 119 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 SOX15O60248 233 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 SIX6O95475 246 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 TRGV3P03979 118 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 OR9G9P0C7N8 305 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 PI3P19957 117 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 CD33P20138 364 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 TPPP2P59282 170 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 SSBP2P81877 361 aaPredicted RBP6.92□□□□□ -1.3
COL8A1-203ENST00000452013 RUNX1Q01196 453 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 PPP1R1AQ13522 171 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 KIAA0141Q14154 515 aaPredicted RBP6.92□□□□□ -1.3
COL8A1-203ENST00000452013 ALKAL2Q6UX46 152 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 C8orf86Q6ZUL3 223 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 TTC9CQ8N5M4 171 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 OR1S1Q8NH92 325 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 MYOZ3Q8TDC0 251 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 C4orf3Q8WVX3 66 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 DPF1Q92782 380 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 TMEM140Q9NV12 185 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 COA4Q9NYJ1 87 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 STAB1Q9NY15 2570 aa6.92□□□□□ -1.3
COL8A1-203ENST00000452013 C13orf42A0A1B0GVH6 325 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 H0Y980 276 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 G6PCP35575 357 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 ASPHD1Q5U4P2 390 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 PRSS54Q6PEW0 395 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 IL34Q6ZMJ4 242 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 C18orf65Q6ZTR6 163 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 H2BFWTQ7Z2G1 175 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 SGPP2Q8IWX5 399 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 OR1L8Q8NGR8 309 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 OR1N2Q8NGR9 330 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 OR4A16Q8NH70 328 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 RNF141Q8WVD5 230 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 MARC2Q969Z3 335 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 SAT2Q96F10 170 aaPredicted RBP6.91□□□□□ -1.3
COL8A1-203ENST00000452013 USMG5Q96IX5 58 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 C2orf50Q96LR7 162 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 AQP10Q96PS8 301 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 SRSF8Q9BRL6 282 aaKnown RBP6.91□□□□□ -1.3
COL8A1-203ENST00000452013 RTBDNQ9BSG5 229 aaPredicted RBP6.91□□□□□ -1.3
COL8A1-203ENST00000452013 MCRIP2Q9BUT9 160 aaKnown RBP6.91□□□□□ -1.3
COL8A1-203ENST00000452013 ZNF471Q9BX82 626 aaPredicted RBP6.91□□□□□ -1.3
COL8A1-203ENST00000452013 PRNDQ9UKY0 176 aa6.91□□□□□ -1.3
COL8A1-203ENST00000452013 TRAV3A0A0B4J244 114 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 TEX50A0A1B0GTY4 177 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 C5orf51A6NDU8 294 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 NPIPB5A8MRT5 1133 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 MPTX1A8MV57 137 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 CYB5BO43169 146 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 IFNA21P01568 189 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 RLN2P04090 185 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 HSPB1P04792 205 aaKnown RBP6.9□□□□□ -1.3
COL8A1-203ENST00000452013 APELAP0DMC3 54 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 HIST1H1BP16401 226 aaKnown RBP6.9□□□□□ -1.3
COL8A1-203ENST00000452013 VAMP1P23763 118 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 SMCO1Q147U7 214 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 SP6Q3SY56 376 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 C10orf55Q5SWW7 151 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 MRPL41Q8IXM3 137 aaKnown RBP6.9□□□□□ -1.3
COL8A1-203ENST00000452013 ADAD2Q8NCV1 583 aaKnown RBP6.9□□□□□ -1.3
COL8A1-203ENST00000452013 OR11H1Q8NG94 326 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 CASTOR1Q8WTX7 329 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 MRGPRFQ96AM1 343 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 RRNAD1Q96FB5 475 aaKnown RBP6.9□□□□□ -1.3
COL8A1-203ENST00000452013 RCC1LQ96I51 464 aaKnown RBP6.9□□□□□ -1.3
COL8A1-203ENST00000452013 RAX2Q96IS3 184 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 SEC22AQ96IW7 307 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 TMEM56Q96MV1 263 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 OR5B12Q96R08 314 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 TP53RKQ96S44 253 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 P2RX4Q99571 388 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 GPR61Q9BZJ8 451 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 C5orf66Q9H5L9 145 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 NAA60Q9H7X0 242 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 GNB4Q9HAV0 340 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 ZC4H2Q9NQZ6 224 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 ZNF257Q9Y2Q1 563 aa6.9□□□□□ -1.3
COL8A1-203ENST00000452013 OR51B2Q9Y5P1 312 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms