RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 LINC00205P59089 165 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 KRTAP10-6P60371 365 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 KRTDAPP60985 99 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 PCBD1P61457 104 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 ARF6P62330 175 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 RPL30P62888 115 aaKnown RBP3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 PMP22Q01453 160 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 RPEL1Q2QD12 228 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 GCSAMLQ5JQS6 135 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 FAM120AOSQ5T036 256 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 EBLN2Q6P2I7 272 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 Q6ZVH6 145 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 SMIM15Q7Z3B0 74 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 DEFB125Q8N687 156 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 SCCPDHQ8NBX0 429 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 ZNF439Q8NDP4 499 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 OR52E5Q8NH55 327 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 C18orf32Q8TCD1 76 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 CORO2AQ92828 525 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 NEUROG1Q92886 237 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 TMEM45BQ96B21 275 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 URB1-AS1Q96HZ7 61 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 POM121L2Q96KW2 1035 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 SAMD10Q9BYL1 202 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 SRXN1Q9BYN0 137 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 CST9LQ9H4G1 147 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 SLC25A10Q9UBX3 287 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 CLN8Q9UBY8 286 aa3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 MRPS17Q9Y2R5 130 aaKnown RBP3.38□□□□□ -1.87
HMGB3P22-202ENST00000451823 TDRD6O60522 2096 aaKnown RBP3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 CEP192Q8TEP8 1941 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 IGHV3-15A0A0B4J1V0 119 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 TRAV38-1A0A0B4J264 116 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 A0A1W2PR80 420 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 IZUMO1RA6ND01 250 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 FNDC10F2Z333 226 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 TRAPPC2LH3BP13 241 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 M0QZ24 198 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 NEURL1O76050 574 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 CA3P07451 260 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 SP1P08047 785 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 PATE4P0C8F1 98 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 ARL14EPLP0DKL9 152 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 NPY1RP25929 384 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 CEACAM3P40198 252 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 HINT1P49773 126 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 LOXL3P58215 753 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 RPL31P62899 125 aaKnown RBP3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 BVES-AS1Q5T3Y7 98 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 STUMQ69YW2 141 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 UFSP1Q6NVU6 142 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 FAM71F2Q6NXP2 309 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 SHISA6Q6ZSJ9 500 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 FAM231DQ6ZW35 169 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 SPATA12Q7Z6I5 190 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 OR8I2Q8N0Y5 310 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 FAM58AQ8N1B3 248 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 BATF2Q8N1L9 274 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 ZNF645Q8N7E2 425 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 IGF2BP2-AS1Q96M15 143 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 MGST2Q99735 147 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 GGTLC1Q9BX51 225 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 LINC00470Q9BZP3 86 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 OR2D2Q9H210 308 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 ST20Q9HBF5 79 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 FGF21Q9NSA1 209 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 TECRQ9NZ01 308 aaKnown RBP3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 PPP1R3CQ9UQK1 317 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 ZNF835Q9Y2P0 537 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 PTPRBP23467 1997 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 RTTNQ86VV8 2226 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 KMT2EQ8IZD2 1858 aa3.37□□□□□ -1.87
HMGB3P22-202ENST00000451823 SEC16AO15027 2179 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 IGKV2D-30A0A075B6S6 120 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 IGKV3D-15A0A087WSY6 115 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 A0A1B0GXF2 115 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 A0A1W2PPV4 95 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 MBD3L4A6NDZ8 208 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 MBD3L3A6NE82 208 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 C17orf98A8MV24 154 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 C21orf140B9A014 251 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 J3QT63 122 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 CD5LO43866 347 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 IGLC1P0CG04 106 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 PSG1P11464 419 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 B4GALT1P15291 398 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 CD27P26842 260 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 SRIP30626 198 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 DUTP33316 252 aaKnown RBP3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 G6PCP35575 357 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 GPM6AP51674 278 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 MLF1P58340 268 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 RPL19P84098 196 aaKnown RBP3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 ZNF146Q15072 292 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 TNXAQ16473 311 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 CEACAM16Q2WEN9 425 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 GDF5OSQ5U4N7 250 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 MIC13Q5XKP0 118 aa3.36□□□□□ -1.87
HMGB3P22-202ENST00000451823 ETFRF1Q6IPR1 90 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms