RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 TMEM61Q8N0U2 210 aa14.58□□□□□ -0.08
USP40-207ENST00000450940 OR1P1Q8NH06 330 aa14.58□□□□□ -0.08
USP40-207ENST00000450940 SCARB1Q8WTV0 552 aa14.58□□□□□ -0.08
USP40-207ENST00000450940 WDR89Q96FK6 387 aaPredicted RBP14.58□□□□□ -0.08
USP40-207ENST00000450940 BSCL2Q96G97 398 aaPredicted RBP14.58□□□□□ -0.08
USP40-207ENST00000450940 SPATA25Q9BR10 227 aa14.58□□□□□ -0.08
USP40-207ENST00000450940 MRPL27Q9P0M9 148 aaKnown RBP14.58□□□□□ -0.08
USP40-207ENST00000450940 F8W735 103 aaPredicted RBP14.57□□□□□ -0.08
USP40-207ENST00000450940 CTDSP2O14595 271 aa14.57□□□□□ -0.08
USP40-207ENST00000450940 P0C879 139 aa14.57□□□□□ -0.08
USP40-207ENST00000450940 GUCA2BQ16661 112 aa14.57□□□□□ -0.08
USP40-207ENST00000450940 OR2C3Q8N628 320 aa14.57□□□□□ -0.08
USP40-207ENST00000450940 OR4A16Q8NH70 328 aa14.57□□□□□ -0.08
USP40-207ENST00000450940 TERB2Q8NHR7 220 aa14.57□□□□□ -0.08
USP40-207ENST00000450940 MRGPRFQ96AM1 343 aa14.57□□□□□ -0.08
USP40-207ENST00000450940 BCL7BQ9BQE9 202 aa14.57□□□□□ -0.08
USP40-207ENST00000450940 EDA2RQ9HAV5 297 aa14.57□□□□□ -0.08
USP40-207ENST00000450940 PLEKHA3Q9HB20 300 aa14.57□□□□□ -0.08
USP40-207ENST00000450940 C21orf62Q9NYP8 219 aa14.57□□□□□ -0.08
USP40-207ENST00000450940 UFC1Q9Y3C8 167 aa14.57□□□□□ -0.08
USP40-207ENST00000450940 TRAV25A0A0B4J276 109 aa14.56□□□□□ -0.08
USP40-207ENST00000450940 PGAM2P15259 253 aa14.56□□□□□ -0.08
USP40-207ENST00000450940 PI3P19957 117 aa14.56□□□□□ -0.08
USP40-207ENST00000450940 PIGPP57054 158 aa14.56□□□□□ -0.08
USP40-207ENST00000450940 TAS2R19P59542 299 aa14.56□□□□□ -0.08
USP40-207ENST00000450940 HSPE1P61604 102 aaKnown RBP14.56□□□□□ -0.08
USP40-207ENST00000450940 MRPS10P82664 201 aaKnown RBP14.56□□□□□ -0.08
USP40-207ENST00000450940 PRCDQ00LT1 54 aa14.56□□□□□ -0.08
USP40-207ENST00000450940 ZNF114Q8NC26 417 aa14.56□□□□□ -0.08
USP40-207ENST00000450940 OR4D10Q8NGI6 311 aa14.56□□□□□ -0.08
USP40-207ENST00000450940 RAB2BQ8WUD1 216 aa14.56□□□□□ -0.08
USP40-207ENST00000450940 TMEM190Q8WZ59 177 aa14.56□□□□□ -0.08
USP40-207ENST00000450940 IGHV3-35A0A0C4DH35 117 aa14.55□□□□□ -0.08
USP40-207ENST00000450940 OR2T8A6NH00 312 aa14.55□□□□□ -0.08
USP40-207ENST00000450940 ADMP35318 185 aa14.55□□□□□ -0.08
USP40-207ENST00000450940 TMBIM6P55061 237 aa14.55□□□□□ -0.08
USP40-207ENST00000450940 CASC10Q5T4H9 136 aa14.55□□□□□ -0.08
USP40-207ENST00000450940 DEFB125Q8N687 156 aa14.55□□□□□ -0.08
USP40-207ENST00000450940 ZFAND1Q8TCF1 268 aa14.55□□□□□ -0.08
USP40-207ENST00000450940 DYNC2LI1Q8TCX1 351 aa14.55□□□□□ -0.08
USP40-207ENST00000450940 TP53RKQ96S44 253 aa14.55□□□□□ -0.08
USP40-207ENST00000450940 CHRDL1Q9BU40 450 aa14.55□□□□□ -0.08
USP40-207ENST00000450940 CEPT1Q9Y6K0 416 aa14.55□□□□□ -0.08
USP40-207ENST00000450940 RBMY1BA6NDE4 496 aaKnown RBP14.54□□□□□ -0.08
USP40-207ENST00000450940 RBMY1EA6NEQ0 496 aaKnown RBP14.54□□□□□ -0.08
USP40-207ENST00000450940 OR11H12B2RN74 326 aa14.54□□□□□ -0.08
USP40-207ENST00000450940 NDUFA4O00483 81 aa14.54□□□□□ -0.08
USP40-207ENST00000450940 RGS5O15539 181 aa14.54□□□□□ -0.08
USP40-207ENST00000450940 RAB3DO95716 219 aa14.54□□□□□ -0.08
USP40-207ENST00000450940 IGKV1-5P01602 117 aa14.54□□□□□ -0.08
USP40-207ENST00000450940 RBMY1DP0C7P1 496 aaKnown RBP14.54□□□□□ -0.08
USP40-207ENST00000450940 FCGR2BP31994 310 aaPredicted RBP14.54□□□□□ -0.08
USP40-207ENST00000450940 STEAP1BQ6NZ63 245 aa14.54□□□□□ -0.08
USP40-207ENST00000450940 BTNL8Q6UX41 500 aa14.54□□□□□ -0.08
USP40-207ENST00000450940 CLVS1Q8IUQ0 354 aaPredicted RBP14.54□□□□□ -0.08
USP40-207ENST00000450940 RABL2AQ9UBK7 228 aaPredicted RBP14.54□□□□□ -0.08
USP40-207ENST00000450940 RABL2BQ9UNT1 228 aa14.54□□□□□ -0.08
USP40-207ENST00000450940 IGHV3-21A0A0B4J1V1 117 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 C3orf85A0A1B0GTC6 90 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 INS-IGF2F8WCM5 200 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 I3L2K1 104 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 K7EMT4 169 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 CTDSPLO15194 276 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 CTSGP08311 255 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 ANKRD55Q3KP44 614 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 SLC16A13Q7RTY0 426 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 SMIM4Q8WVI0 70 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 ZNF414Q96IQ9 312 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 WFDC10AQ9H1F0 79 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 HIPK2Q9H2X6 1198 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 C5orf66Q9H5L9 145 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 DAZ1Q9NQZ3 744 aaKnown RBP14.53□□□□□ -0.08
USP40-207ENST00000450940 GAR1Q9NY12 217 aaKnown RBP14.53□□□□□ -0.08
USP40-207ENST00000450940 CCDC59Q9P031 241 aaKnown RBP14.53□□□□□ -0.08
USP40-207ENST00000450940 SELENOKQ9Y6D0 94 aa14.53□□□□□ -0.08
USP40-207ENST00000450940 A0A0B4J293 547 aa14.52□□□□□ -0.09
USP40-207ENST00000450940 B3GALNT1O75752 331 aa14.52□□□□□ -0.09
USP40-207ENST00000450940 CTSDP07339 412 aaPredicted RBP14.52□□□□□ -0.09
USP40-207ENST00000450940 UCP1P25874 307 aa14.52□□□□□ -0.09
USP40-207ENST00000450940 PPP5CP53041 499 aa14.52□□□□□ -0.09
USP40-207ENST00000450940 MEF2DQ14814 521 aa14.52□□□□□ -0.09
USP40-207ENST00000450940 CCDC71LQ8N9Z2 235 aa14.52□□□□□ -0.09
USP40-207ENST00000450940 OR13C8Q8NGS7 320 aa14.52□□□□□ -0.09
USP40-207ENST00000450940 TXN2Q99757 166 aa14.52□□□□□ -0.09
USP40-207ENST00000450940 SRD5A3Q9H8P0 318 aa14.52□□□□□ -0.09
USP40-207ENST00000450940 COPZ2Q9P299 210 aa14.52□□□□□ -0.09
USP40-207ENST00000450940 DYNC2H1Q8NCM8 4307 aaKnown RBP14.51□□□□□ -0.09
USP40-207ENST00000450940 ATG12O94817 140 aa14.51□□□□□ -0.09
USP40-207ENST00000450940 LYL1P12980 280 aa14.51□□□□□ -0.09
USP40-207ENST00000450940 ERHP84090 104 aaKnown RBP14.51□□□□□ -0.09
USP40-207ENST00000450940 IZUMO4Q1ZYL8 232 aa14.51□□□□□ -0.09
USP40-207ENST00000450940 OR52B4Q8NGK2 314 aa14.51□□□□□ -0.09
USP40-207ENST00000450940 MARCH1Q8TCQ1 289 aa14.51□□□□□ -0.09
USP40-207ENST00000450940 C15orf62A8K5M9 175 aa14.5□□□□□ -0.09
USP40-207ENST00000450940 SCAF4O95104 1147 aaKnown RBP14.5□□□□□ -0.09
USP40-207ENST00000450940 RPL5P46777 297 aaKnown RBP14.5□□□□□ -0.09
USP40-207ENST00000450940 MFAP4P55083 255 aa14.5□□□□□ -0.09
USP40-207ENST00000450940 SURF2Q15527 256 aaPredicted RBP14.5□□□□□ -0.09
USP40-207ENST00000450940 SP6Q3SY56 376 aa14.5□□□□□ -0.09
USP40-207ENST00000450940 SCGB2B2Q4G0G5 96 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms