RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MAP1LC3B2A6NCE7 125 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 OPN1MWP04001 364 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 OPN1MW2P0DN77 364 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 OPN1MW3P0DN78 364 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 RNASE2P10153 161 aaKnown RBP8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 MYOD1P15172 320 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 GPX4P36969 197 aaPredicted RBP8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 TAGLN2P37802 199 aaKnown RBP8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 LMO4P61968 165 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 PSG5Q15238 335 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 PRSS8Q16651 343 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 KHDC3LQ587J8 217 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 RNASEH2CQ8TDP1 164 aaKnown RBP8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 FAM168AQ92567 244 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 SCRT1Q9BWW7 348 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 NKX6-2Q9C056 277 aaPredicted RBP8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 MAP1LC3BQ9GZQ8 125 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 SLC35B3Q9H1N7 401 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 VSIRQ9H7M9 311 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 SIGLEC9Q9Y336 463 aa8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 TBL2Q9Y4P3 447 aaKnown RBP8.51□□□□□ -1.05
VIPAS39-203ENST00000448935 A0A1B0GV50 99 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 FAM157AC9JC47 383 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 HSPB1P04792 205 aaKnown RBP8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 CRYGBP07316 175 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 ADCYAP1P18509 176 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 ZFP36P26651 326 aaKnown RBP8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 RPL27AP46776 148 aaKnown RBP8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 COMPP49747 757 aaPredicted RBP8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 PPT1P50897 306 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 DLX1P56177 255 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 LCN2P80188 198 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 HABP2Q14520 560 aaPredicted RBP8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 ODF1Q14990 250 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 ZNF506Q5JVG8 444 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 ACSM6Q6P461 480 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 CLEC2AQ6UVW9 174 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 RBMS3Q6XE24 437 aaKnown RBP8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 PPP1R27Q86WC6 154 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 SIRPDQ9H106 197 aa8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 METTL1Q9UBP6 276 aaKnown RBP8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 LSM4Q9Y4Z0 139 aaKnown RBP8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 ASH1LQ9NR48 2969 aaKnown RBP8.5□□□□□ -1.05
VIPAS39-203ENST00000448935 A0A1W2PPV4 95 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 TIMM23O14925 209 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 TOX4O94842 621 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 VENTXO95231 258 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 SNRNP70P08621 437 aaKnown RBP8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 COX6B1P14854 86 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 DSCR9P59020 149 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 CCL20P78556 96 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 PAX2Q02962 417 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 CD69Q07108 199 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 ETFRF1Q6IPR1 90 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 HCP5Q6MZN7 132 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 LCN15Q6UWW0 184 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 TMEM144Q7Z5S9 345 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 RPP25LQ8N5L8 163 aaKnown RBP8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 SRSF8Q9BRL6 282 aaKnown RBP8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 GGTLC1Q9BX51 225 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 LPAR2Q9HBW0 351 aa8.49□□□□□ -1.05
VIPAS39-203ENST00000448935 SEC14L6B5MCN3 397 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 CORTO00230 105 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 NDUFS6O75380 124 aaKnown RBP8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 SCO1O75880 301 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 MOSP00540 346 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 RPL29P47914 159 aaKnown RBP8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 CDC34P49427 236 aaPredicted RBP8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 UBE2E1P51965 193 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 KLRD1Q13241 179 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 PLGLAQ15195 96 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 ZNF726P1Q15940 193 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 TNXAQ16473 311 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 OR10W1Q8NGF6 305 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 OR2T10Q8NGZ9 312 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 C10orf105Q8TEF2 133 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 CFHR4Q92496 578 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 SLC35E1Q96K37 410 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 P2RX4Q99571 388 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 MGST2Q99735 147 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 PXMP4Q9Y6I8 212 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 MAST4O15021 2626 aa8.48□□□□□ -1.05
VIPAS39-203ENST00000448935 LOC102723971A0A1B0GUV8 181 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 C9JQL5 133 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 NBR2O15453 112 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 OR13C7P0DN81 318 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 BCL2P10415 239 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 ATP5J2P56134 94 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 B2MP61769 119 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 PRB3Q04118 309 aaPredicted RBP8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 HNF4GQ14541 408 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 HAGHQ16775 308 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 TMEM249Q2WGJ8 235 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 SOHLH1Q5JUK2 328 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 FAM122CQ6P4D5 195 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 ZNF114Q8NC26 417 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 SUN5Q8TC36 379 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 RAB24Q969Q5 203 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 MALSU1Q96EH3 234 aa8.47□□□□□ -1.05
VIPAS39-203ENST00000448935 RITA1Q96K30 269 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms