RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 FOXE3Q13461 319 aa7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 C2orf91Q6ZV80 131 aa7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 OR10W1Q8NGF6 305 aa7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 OR4A16Q8NH70 328 aa7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 PHF7Q9BWX1 381 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 THYN1Q9P016 225 aa7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 A0A1W2PRE2 83 aa7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 PRAMEF5Q5TYX0 476 aa7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 PRAMEF6Q5VXH4 476 aa7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 SLC35E4Q6ICL7 350 aa7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 SLC23A3Q6PIS1 610 aa7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 HSD17B10Q99714 261 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 SPCS1Q9Y6A9 102 aa7.78□□□□□ -1.16
SYNPO2-204ENST00000448416 PPIAL4CA0A0B4J2A2 164 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 ANKRD30BLA7E2S9 258 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 SP9P0CG40 484 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 OR5A1Q8NGJ0 315 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 CHCHD1Q96BP2 118 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 PERPQ96FX8 193 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 LSM4Q9Y4Z0 139 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 HILPDAQ9Y5L2 63 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 GGTLC3B5MD39 225 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 C9orf135Q5VTT2 229 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 LYSMD4Q5XG99 296 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 WDR82Q6UXN9 313 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 FAM214BQ7L5A3 538 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 PLXDC1Q8IUK5 500 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 VSTM2AQ8TAG5 236 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 GRAMD2BQ96HH9 432 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 MBNL3Q9NUK0 354 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 HIGD1CA8MV81 97 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 NGFP01138 241 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 LIPFP07098 398 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 DSCR4P56555 118 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 TMPRSS3P57727 454 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 RAC3P60763 192 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 HSD52Q0P140 79 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 FAM216AQ8WUB2 273 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 SNRNP40Q96DI7 357 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 IGF2BP2-AS1Q96M15 143 aa7.77□□□□□ -1.17
SYNPO2-204ENST00000448416 LINC00473A8K010 186 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 MEF2CQ06413 473 aaPredicted RBP7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 KIR3DS1Q14943 382 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 C1orf159Q96HA4 380 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 POM121L2Q96KW2 1035 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 CDX2Q99626 313 aaPredicted RBP7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 SLC25A10Q9UBX3 287 aaPredicted RBP7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 PPIAL4EA0A075B759 164 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 A0A0G2JMM0 328 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 A0A1W2PPB8 328 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 KIR3DP1A8MWS1 328 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 PRSS46E5RG02 174 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 PPIAL4FP0DN26 164 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 CD24P25063 80 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 NANOS1Q8WY41 292 aaKnown RBP7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 H1FXQ92522 213 aaKnown RBP7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 LINC00479Q96M42 142 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 A0A096LPE4 126 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 TEX48A0A1B0GUV7 120 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 A0A1W2PPZ6 126 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 GFRA3O60609 400 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 OR5AL1P0C617 328 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 LIFP15018 202 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 IGFBP2P18065 325 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 RAB9AP51151 201 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 CFHR1Q03591 330 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 EIF4EBP1Q13541 118 aaPredicted RBP7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 BHLHA15Q7RTS1 189 aaPredicted RBP7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 HCFC1P51610 2035 aa7.76□□□□□ -1.17
SYNPO2-204ENST00000448416 MYF5P13349 255 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 PSG3Q16557 428 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 SPEM1Q8N4L4 309 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 TPRX1Q8N7U7 411 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 MBD6Q96DN6 1003 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 NABP2Q9BQ15 211 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 IGFLR1Q9H665 355 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 IGHV1OR21-1A0A087WYE8 117 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 ZNF716A6NP11 495 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 C22orf46C9J442 243 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 F2RL2O00254 374 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 CXCL13O43927 109 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 CER1O95813 267 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 WDR31Q8NA23 367 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 IDI2-AS1Q9NZ38 188 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 HSPB8Q9UJY1 196 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 PSMB11A5LHX3 300 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 C12orf77C9JDV5 145 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 CCL3P10147 92 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 VDAC2P45880 294 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 CKS1BP61024 79 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 A0A1W2PPC4 97 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 A0A1W2PPM0 123 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 J3QT63 122 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 FCGR3BO75015 233 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 DEFB119Q8N690 84 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 PKIBQ9C010 78 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 IL23AQ9NPF7 189 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 PSG11Q9UQ72 335 aa7.75□□□□□ -1.17
SYNPO2-204ENST00000448416 MPC1Q9Y5U8 109 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms