RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 FDCSPQ8NFU4 85 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 SAMD10Q9BYL1 202 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 DKK4Q9UBT3 224 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 DSCAMO60469 2012 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 IGKV1OR2-108A0A075B7D4 117 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 UPK2O00526 184 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 MYOD1P15172 320 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 TIGITQ495A1 244 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 C2orf83Q53S99 150 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 LYG1Q8N1E2 194 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 HINT2Q9BX68 163 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 LINC00574Q9H8X3 128 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 GNB4Q9HAV0 340 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 TANC2Q9HCD6 1990 aa15.61■□□□□ 0.09
SDCBP-204ENST00000447182 GPX1P07203 203 aa15.6■□□□□ 0.09
SDCBP-204ENST00000447182 BRS3P32247 399 aa15.6■□□□□ 0.09
SDCBP-204ENST00000447182 GATA4P43694 442 aa15.6■□□□□ 0.09
SDCBP-204ENST00000447182 CCL11P51671 97 aa15.6■□□□□ 0.09
SDCBP-204ENST00000447182 TAS2R45P59539 299 aa15.6■□□□□ 0.09
SDCBP-204ENST00000447182 TMEM136Q6ZRR5 245 aa15.6■□□□□ 0.09
SDCBP-204ENST00000447182 VAMP8Q9BV40 100 aa15.6■□□□□ 0.09
SDCBP-204ENST00000447182 TRAV17A0A0B4J275 112 aa15.59■□□□□ 0.09
SDCBP-204ENST00000447182 A0A1W2PRE2 83 aa15.59■□□□□ 0.09
SDCBP-204ENST00000447182 KLF3P57682 345 aaPredicted RBP15.59■□□□□ 0.09
SDCBP-204ENST00000447182 DOLPP1Q86YN1 238 aa15.59■□□□□ 0.09
SDCBP-204ENST00000447182 SIGLECL1Q8N7X8 197 aa15.59■□□□□ 0.09
SDCBP-204ENST00000447182 VN1R17PQ8TDU5 208 aa15.59■□□□□ 0.09
SDCBP-204ENST00000447182 NAT8BQ9UHF3 227 aa15.59■□□□□ 0.09
SDCBP-204ENST00000447182 COL6A3P12111 3177 aa15.59■□□□□ 0.09
SDCBP-204ENST00000447182 GGTLC3B5MD39 225 aa15.59■□□□□ 0.09
SDCBP-204ENST00000447182 IGLV2-8P01709 118 aa15.59■□□□□ 0.09
SDCBP-204ENST00000447182 GLRXP35754 106 aa15.59■□□□□ 0.09
SDCBP-204ENST00000447182 TMEM30BQ3MIR4 351 aa15.59■□□□□ 0.09
SDCBP-204ENST00000447182 ITLN1Q8WWA0 313 aa15.59■□□□□ 0.09
SDCBP-204ENST00000447182 RNASE7Q9H1E1 156 aaKnown RBP15.59■□□□□ 0.09
SDCBP-204ENST00000447182 PRRC2CQ9Y520 2896 aaKnown RBP15.58■□□□□ 0.09
SDCBP-204ENST00000447182 RPLP1P05386 114 aaKnown RBP15.58■□□□□ 0.08
SDCBP-204ENST00000447182 MOB3BQ86TA1 216 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 OR1L8Q8NGR8 309 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 IGF2BP2-AS1Q96M15 143 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 NCOR1O75376 2440 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 SMIM27A0A1W2PRY6 76 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 NKX2-8O15522 239 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 OR7C2O60412 319 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 PPOXP50336 477 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 STUMQ69YW2 141 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 FAM122AQ96E09 287 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 ZNF586Q9NXT0 402 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 FBXL7Q9UJT9 491 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 PAM16Q9Y3D7 125 aa15.58■□□□□ 0.08
SDCBP-204ENST00000447182 IGLV3-9A0A075B6K5 115 aa15.57■□□□□ 0.08
SDCBP-204ENST00000447182 TEX50A0A1B0GTY4 177 aa15.57■□□□□ 0.08
SDCBP-204ENST00000447182 SPRY3O43610 288 aa15.57■□□□□ 0.08
SDCBP-204ENST00000447182 CT45A6P0DMU7 189 aa15.57■□□□□ 0.08
SDCBP-204ENST00000447182 CT45A5P0DMU8 189 aa15.57■□□□□ 0.08
SDCBP-204ENST00000447182 CT45A7P0DMV0 189 aa15.57■□□□□ 0.08
SDCBP-204ENST00000447182 ZNF83P51522 516 aa15.57■□□□□ 0.08
SDCBP-204ENST00000447182 FAM201AQ5SY85 155 aa15.57■□□□□ 0.08
SDCBP-204ENST00000447182 SLC25A48Q6ZT89 311 aaKnown RBP15.57■□□□□ 0.08
SDCBP-204ENST00000447182 OR5B3Q8NH48 314 aa15.57■□□□□ 0.08
SDCBP-204ENST00000447182 SLC25A33Q9BSK2 321 aa15.57■□□□□ 0.08
SDCBP-204ENST00000447182 BET1LQ9NYM9 111 aa15.57■□□□□ 0.08
SDCBP-204ENST00000447182 NBEAQ8NFP9 2946 aa15.57■□□□□ 0.08
SDCBP-204ENST00000447182 TNCP24821 2201 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 SRRM4A7MD48 611 aaKnown RBP15.56■□□□□ 0.08
SDCBP-204ENST00000447182 HLA-DQA1P01909 254 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 C8orf88P0DMB2 117 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 C3orf36Q3SXR2 165 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 Q8N976 141 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 OR4B1Q8NGF8 309 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 KCNS1Q96KK3 526 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 RNF2Q99496 336 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 RNF7Q9UBF6 113 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 COLQQ9Y215 455 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-204ENST00000447182 TM4SF5O14894 197 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 IGKV1-16P04430 117 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 AMY1AP04745 511 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 RNASE2P10153 161 aaKnown RBP15.56■□□□□ 0.08
SDCBP-204ENST00000447182 IRF2P14316 349 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 G0S2P27469 103 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 SUMO1P63165 101 aaKnown RBP15.56■□□□□ 0.08
SDCBP-204ENST00000447182 TIMM23BQ5SRD1 257 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 IBA57Q5T440 356 aaKnown RBP15.56■□□□□ 0.08
SDCBP-204ENST00000447182 MRPL32Q9BYC8 188 aaKnown RBP15.56■□□□□ 0.08
SDCBP-204ENST00000447182 SLC35D1Q9NTN3 355 aa15.56■□□□□ 0.08
SDCBP-204ENST00000447182 MBD3L4A6NDZ8 208 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-204ENST00000447182 MBD3L3A6NE82 208 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-204ENST00000447182 MBD3L5A6NJ08 208 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-204ENST00000447182 PCNX2A6NKB5 2137 aa15.55■□□□□ 0.08
SDCBP-204ENST00000447182 REG1AP05451 166 aa15.55■□□□□ 0.08
SDCBP-204ENST00000447182 ZNF25P17030 456 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-204ENST00000447182 GATA2P23769 480 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-204ENST00000447182 FXYD3Q14802 87 aa15.55■□□□□ 0.08
SDCBP-204ENST00000447182 DUX4L9Q6RFH8 374 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-204ENST00000447182 SEM1Q6ZVN7 128 aa15.55■□□□□ 0.08
SDCBP-204ENST00000447182 MBD3L2Q8NHZ7 208 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-204ENST00000447182 GAFA1Q96PS6 74 aa15.55■□□□□ 0.08
SDCBP-204ENST00000447182 RPUSD1Q9UJJ7 312 aaKnown RBP15.55■□□□□ 0.08
SDCBP-204ENST00000447182 TBL2Q9Y4P3 447 aaKnown RBP15.55■□□□□ 0.08
SDCBP-204ENST00000447182 RNF114Q9Y508 228 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms