RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 IGHV3-21A0A0B4J1V1 117 aa14.26□□□□□ -0.13
HDAC4-203ENST00000445704 A0A0G2JRQ6 117 aa14.26□□□□□ -0.13
HDAC4-203ENST00000445704 OR5AC1P0C628 307 aa14.26□□□□□ -0.13
HDAC4-203ENST00000445704 AKR1C2P52895 323 aa14.26□□□□□ -0.13
HDAC4-203ENST00000445704 PRCDQ00LT1 54 aa14.26□□□□□ -0.13
HDAC4-203ENST00000445704 CCDC190Q86UF4 302 aa14.26□□□□□ -0.13
HDAC4-203ENST00000445704 LHFPL5Q8TAF8 219 aa14.26□□□□□ -0.13
HDAC4-203ENST00000445704 NAA60Q9H7X0 242 aa14.26□□□□□ -0.13
HDAC4-203ENST00000445704 THYN1Q9P016 225 aa14.26□□□□□ -0.13
HDAC4-203ENST00000445704 A0A0B4J293 547 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 IZUMO1RA6ND01 250 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 CLEC3BP05452 202 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 GPR183P32249 361 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 S100A5P33763 92 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 HSPE1P61604 102 aaKnown RBP14.25□□□□□ -0.13
HDAC4-203ENST00000445704 KLF9Q13886 244 aaPredicted RBP14.25□□□□□ -0.13
HDAC4-203ENST00000445704 PYDC2Q56P42 97 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 SPINK9Q5DT21 86 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 GPHB5Q86YW7 130 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 VN1R17PQ8TDU5 208 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 GLYATL2Q8WU03 294 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 TMEM230Q96A57 120 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 TMEM222Q9H0R3 208 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 SMAD5-AS1Q9Y6J3 95 aa14.25□□□□□ -0.13
HDAC4-203ENST00000445704 TEX13DA0A0J9YY54 714 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-203ENST00000445704 CRYM-AS1A6NIL9 109 aa14.24□□□□□ -0.13
HDAC4-203ENST00000445704 C2orf70A6NJV1 201 aa14.24□□□□□ -0.13
HDAC4-203ENST00000445704 K7EIM0 57 aa14.24□□□□□ -0.13
HDAC4-203ENST00000445704 LGALS9O00182 355 aa14.24□□□□□ -0.13
HDAC4-203ENST00000445704 CYB5BO43169 146 aa14.24□□□□□ -0.13
HDAC4-203ENST00000445704 OR2C3Q8N628 320 aa14.24□□□□□ -0.13
HDAC4-203ENST00000445704 MCUBQ9NWR8 336 aa14.24□□□□□ -0.13
HDAC4-203ENST00000445704 ST8SIA3O43173 380 aa14.23□□□□□ -0.13
HDAC4-203ENST00000445704 B3GALNT1O75752 331 aa14.23□□□□□ -0.13
HDAC4-203ENST00000445704 ATG12O94817 140 aa14.23□□□□□ -0.13
HDAC4-203ENST00000445704 CDS2O95674 445 aa14.23□□□□□ -0.13
HDAC4-203ENST00000445704 Q8N1Y9 231 aa14.23□□□□□ -0.13
HDAC4-203ENST00000445704 Q8N402 240 aa14.23□□□□□ -0.13
HDAC4-203ENST00000445704 OR1P1Q8NH06 330 aa14.23□□□□□ -0.13
HDAC4-203ENST00000445704 SCARB1Q8WTV0 552 aa14.23□□□□□ -0.13
HDAC4-203ENST00000445704 CACNG8Q8WXS5 425 aa14.23□□□□□ -0.13
HDAC4-203ENST00000445704 SCP2D1Q9UJQ7 156 aa14.23□□□□□ -0.13
HDAC4-203ENST00000445704 IGHV3-35A0A0C4DH35 117 aa14.22□□□□□ -0.13
HDAC4-203ENST00000445704 F8W735 103 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-203ENST00000445704 FOLR2P14207 255 aa14.22□□□□□ -0.13
HDAC4-203ENST00000445704 UNQ9165/PRO28630Q6UXU0 137 aa14.22□□□□□ -0.13
HDAC4-203ENST00000445704 Q6ZRM9 215 aa14.22□□□□□ -0.13
HDAC4-203ENST00000445704 SELENOHQ8IZQ5 122 aaKnown RBP14.22□□□□□ -0.13
HDAC4-203ENST00000445704 ZNF114Q8NC26 417 aa14.22□□□□□ -0.13
HDAC4-203ENST00000445704 ASCL2Q99929 193 aa14.22□□□□□ -0.13
HDAC4-203ENST00000445704 PLEKHA3Q9HB20 300 aa14.22□□□□□ -0.13
HDAC4-203ENST00000445704 PRR13Q9NZ81 148 aa14.22□□□□□ -0.13
HDAC4-203ENST00000445704 COL7A1Q02388 2944 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 ZNF320A2RRD8 509 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 TMEM213A2RRL7 107 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 OR2T8A6NH00 312 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 A8MWP6 167 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 TGOLN2O43493 480 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 CD300EQ496F6 205 aaPredicted RBP14.21□□□□□ -0.13
HDAC4-203ENST00000445704 FAM106AQ4KMX7 169 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 LCN12Q6JVE5 192 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 PLET1Q6UQ28 207 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 TOMM5Q8N4H5 51 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 OR1L6Q8NGR2 347 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 RNASE11Q8TAA1 199 aaKnown RBP14.21□□□□□ -0.13
HDAC4-203ENST00000445704 RRNAD1Q96FB5 475 aaKnown RBP14.21□□□□□ -0.13
HDAC4-203ENST00000445704 C21orf62Q9NYP8 219 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 SELENOKQ9Y6D0 94 aa14.21□□□□□ -0.13
HDAC4-203ENST00000445704 I3L2K1 104 aa14.2□□□□□ -0.14
HDAC4-203ENST00000445704 ETV6P41212 452 aa14.2□□□□□ -0.14
HDAC4-203ENST00000445704 DHODHQ02127 395 aa14.2□□□□□ -0.14
HDAC4-203ENST00000445704 DEFB114Q30KQ6 69 aa14.2□□□□□ -0.14
HDAC4-203ENST00000445704 TMEM268Q5VZI3 342 aa14.2□□□□□ -0.14
HDAC4-203ENST00000445704 OR2K2Q8NGT1 345 aa14.2□□□□□ -0.14
HDAC4-203ENST00000445704 RBPMSQ93062 196 aaKnown RBP14.2□□□□□ -0.14
HDAC4-203ENST00000445704 MISP3Q96FF7 219 aa14.2□□□□□ -0.14
HDAC4-203ENST00000445704 CHRDL1Q9BU40 450 aa14.2□□□□□ -0.14
HDAC4-203ENST00000445704 ZNF436Q9C0F3 470 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-203ENST00000445704 SRRQ9GZT4 340 aa14.2□□□□□ -0.14
HDAC4-203ENST00000445704 IFNA17P01571 189 aa14.19□□□□□ -0.14
HDAC4-203ENST00000445704 FRMD6-AS1P0C7T7 363 aa14.19□□□□□ -0.14
HDAC4-203ENST00000445704 CBLN1P23435 193 aa14.19□□□□□ -0.14
HDAC4-203ENST00000445704 ADMP35318 185 aa14.19□□□□□ -0.14
HDAC4-203ENST00000445704 FAUP35544 74 aaKnown RBP14.19□□□□□ -0.14
HDAC4-203ENST00000445704 SUPT4H1P63272 117 aaKnown RBP14.19□□□□□ -0.14
HDAC4-203ENST00000445704 TMEM187Q14656 261 aa14.19□□□□□ -0.14
HDAC4-203ENST00000445704 SLC35G3Q8N808 338 aa14.19□□□□□ -0.14
HDAC4-203ENST00000445704 UBAC2Q8NBM4 344 aa14.19□□□□□ -0.14
HDAC4-203ENST00000445704 DYNLRB2Q8TF09 96 aa14.19□□□□□ -0.14
HDAC4-203ENST00000445704 GPR146Q96CH1 333 aa14.19□□□□□ -0.14
HDAC4-203ENST00000445704 GALNT14Q96FL9 552 aa14.19□□□□□ -0.14
HDAC4-203ENST00000445704 BSCL2Q96G97 398 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-203ENST00000445704 ZNF414Q96IQ9 312 aa14.19□□□□□ -0.14
HDAC4-203ENST00000445704 TMEM56-RWDD3S4R434 201 aa14.19□□□□□ -0.14
HDAC4-203ENST00000445704 INS-IGF2F8WCM5 200 aa14.18□□□□□ -0.14
HDAC4-203ENST00000445704 AKR1C4P17516 323 aa14.18□□□□□ -0.14
HDAC4-203ENST00000445704 AP3S2P59780 193 aa14.18□□□□□ -0.14
HDAC4-203ENST00000445704 ERHP84090 104 aaKnown RBP14.18□□□□□ -0.14
HDAC4-203ENST00000445704 AARDQ4LEZ3 155 aa14.18□□□□□ -0.14
HDAC4-203ENST00000445704 TM4SF20Q53R12 229 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms