RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-213	ENST00000445064	TAS2R20	P59543	309 aa		11.43	□□□□□ -0.58
SEC13-213	ENST00000445064	TMEM69	Q5SWH9	247 aa		11.43	□□□□□ -0.58
SEC13-213	ENST00000445064	LYSMD2	Q8IV50	215 aa		11.43	□□□□□ -0.58
SEC13-213	ENST00000445064	CMTM1	Q8IZ96	169 aa		11.43	□□□□□ -0.58
SEC13-213	ENST00000445064	OR6F1	Q8NGZ6	308 aa		11.43	□□□□□ -0.58
SEC13-213	ENST00000445064	OR5B3	Q8NH48	314 aa		11.43	□□□□□ -0.58
SEC13-213	ENST00000445064	RNF183	Q96D59	192 aa		11.43	□□□□□ -0.58
SEC13-213	ENST00000445064	TMEM56	Q96MV1	263 aa		11.43	□□□□□ -0.58
SEC13-213	ENST00000445064	ANAPC10	Q9UM13	185 aa		11.43	□□□□□ -0.58
SEC13-213	ENST00000445064	OR4C46	A6NHA9	309 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	GPR31	O00270	319 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	NAT1	P18440	290 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	LSM3	P62310	102 aa	Known RBP	11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	UBE2NL	Q5JXB2	153 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	CROCCP3	Q8IVE0	287 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	APRG1	Q8IVJ8	170 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	CADM3	Q8N126	398 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	SAMD12	Q8N8I0	201 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	ZNF414	Q96IQ9	312 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	ATP6V0B	Q99437	205 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	FXYD6	Q9H0Q3	95 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	FKBP11	Q9NYL4	201 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	SMPX	Q9UHP9	88 aa		11.42	□□□□□ -0.58
SEC13-213	ENST00000445064	IGHV3-49	A0A0A0MS15	119 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	KIR2DL5B	A0A0G2JN68	375 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	KIR2DL5B	A0A0G2JPC4	375 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	NUPR2	A6NF83	97 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	C15orf62	A8K5M9	175 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	HLA-DMA	P28067	261 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	PRSS3	P35030	304 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	TAS2R46	P59540	309 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	ZNF124	Q15973	351 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	PHLDA2	Q53GA4	152 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	KIR2DL5A	Q8N109	375 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	KIR2DL5B	Q8NHK3	375 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	GALNT14	Q96FL9	552 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	RNF2	Q99496	336 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	MAP6D1	Q9H9H5	199 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	PRND	Q9UKY0	176 aa		11.41	□□□□□ -0.58
SEC13-213	ENST00000445064	IGKV3-7	A0A075B6H7	116 aa		11.4	□□□□□ -0.58
SEC13-213	ENST00000445064	CHEK1	O14757	476 aa		11.4	□□□□□ -0.58
SEC13-213	ENST00000445064	YIF1A	O95070	293 aa		11.4	□□□□□ -0.58
SEC13-213	ENST00000445064	IGHV3-48	P01763	117 aa		11.4	□□□□□ -0.58
SEC13-213	ENST00000445064	FCGR2B	P31994	310 aa	Predicted RBP	11.4	□□□□□ -0.58
SEC13-213	ENST00000445064	HRH1	P35367	487 aa		11.4	□□□□□ -0.58
SEC13-213	ENST00000445064	TFPI2	P48307	235 aa		11.4	□□□□□ -0.58
SEC13-213	ENST00000445064	SLC25A46	Q96AG3	418 aa		11.4	□□□□□ -0.58
SEC13-213	ENST00000445064	MISP3	Q96FF7	219 aa		11.4	□□□□□ -0.58
SEC13-213	ENST00000445064	RHPN1-AS1	Q9BWJ2	59 aa		11.4	□□□□□ -0.58
SEC13-213	ENST00000445064	TMEM14B	Q9NUH8	114 aa		11.4	□□□□□ -0.58
SEC13-213	ENST00000445064	IGHV7-4-1	A0A0J9YVY3	117 aa		11.39	□□□□□ -0.59
SEC13-213	ENST00000445064	C15orf61	A6NNL5	157 aa		11.39	□□□□□ -0.59
SEC13-213	ENST00000445064		I3L2K1	104 aa		11.39	□□□□□ -0.59
SEC13-213	ENST00000445064	NUPL2	O15504	423 aa	Known RBP	11.39	□□□□□ -0.59
SEC13-213	ENST00000445064	MFAP4	P55083	255 aa		11.39	□□□□□ -0.59
SEC13-213	ENST00000445064	TSPAN5	P62079	268 aa		11.39	□□□□□ -0.59
SEC13-213	ENST00000445064	KCTD21	Q4G0X4	260 aa		11.39	□□□□□ -0.59
SEC13-213	ENST00000445064	TBC1D26	Q86UD7	250 aa		11.39	□□□□□ -0.59
SEC13-213	ENST00000445064	TMEM116	Q8NCL8	245 aa		11.39	□□□□□ -0.59
SEC13-213	ENST00000445064	OR1P1	Q8NH06	330 aa		11.39	□□□□□ -0.59
SEC13-213	ENST00000445064	SEC22A	Q96IW7	307 aa		11.39	□□□□□ -0.59
SEC13-213	ENST00000445064	TSC22D3	Q99576	134 aa		11.39	□□□□□ -0.59
SEC13-213	ENST00000445064	PLEC	Q15149	4684 aa	Known RBP	11.39	□□□□□ -0.59
SEC13-213	ENST00000445064	IGHV3OR16-13	A0A075B7E8	117 aa		11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	IGHV3-74	A0A0B4J1X5	117 aa		11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	IGKV1-39	P01597	117 aa		11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	IGKV1D-39	P04432	117 aa		11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	EIF4E	P06730	217 aa	Known RBP	11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	REL	Q04864	619 aa	Predicted RBP	11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	LPCAT3	Q6P1A2	487 aa		11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	H2BFWT	Q7Z2G1	175 aa		11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	GBGT1	Q8N5D6	347 aa		11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	OR4A16	Q8NH70	328 aa		11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	YIPF6	Q96EC8	236 aa		11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	KLK5	Q9Y337	293 aa	Predicted RBP	11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	ALMS1	Q8TCU4	4167 aa		11.38	□□□□□ -0.59
SEC13-213	ENST00000445064	TRAV14DV4	A0A0A6YYC5	116 aa		11.37	□□□□□ -0.59
SEC13-213	ENST00000445064	MT-CO2	P00403	227 aa		11.37	□□□□□ -0.59
SEC13-213	ENST00000445064	ATF4	P18848	351 aa	Predicted RBP	11.37	□□□□□ -0.59
SEC13-213	ENST00000445064	GPX8	Q8TED1	209 aa		11.37	□□□□□ -0.59
SEC13-213	ENST00000445064	PINX1	Q96BK5	328 aa	Known RBP	11.37	□□□□□ -0.59
SEC13-213	ENST00000445064	OR10C1	Q96KK4	312 aa		11.37	□□□□□ -0.59
SEC13-213	ENST00000445064	TXN2	Q99757	166 aa		11.37	□□□□□ -0.59
SEC13-213	ENST00000445064	NXF2	Q9GZY0	626 aa	Known RBP	11.37	□□□□□ -0.59
SEC13-213	ENST00000445064	CSTL1	Q9H114	145 aa		11.37	□□□□□ -0.59
SEC13-213	ENST00000445064	COMMD3	Q9UBI1	195 aa		11.37	□□□□□ -0.59
SEC13-213	ENST00000445064	GNG7	O60262	68 aa		11.36	□□□□□ -0.59
SEC13-213	ENST00000445064	S100G	P29377	79 aa		11.36	□□□□□ -0.59
SEC13-213	ENST00000445064	CMC4	P56277	68 aa	Predicted RBP	11.36	□□□□□ -0.59
SEC13-213	ENST00000445064	FAM90A2P	Q658T7	463 aa		11.36	□□□□□ -0.59
SEC13-213	ENST00000445064	TMEM217	Q8N7C4	229 aa		11.36	□□□□□ -0.59
SEC13-213	ENST00000445064	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.36	□□□□□ -0.59
SEC13-213	ENST00000445064	MRGPRF	Q96AM1	343 aa		11.36	□□□□□ -0.59
SEC13-213	ENST00000445064	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.36	□□□□□ -0.59
SEC13-213	ENST00000445064	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.36	□□□□□ -0.59
SEC13-213	ENST00000445064	SMIM31	A0A1B0GVY4	71 aa		11.35	□□□□□ -0.59
SEC13-213	ENST00000445064	MPTX1	A8MV57	137 aa		11.35	□□□□□ -0.59
SEC13-213	ENST00000445064	HSPE1	P61604	102 aa	Known RBP	11.35	□□□□□ -0.59
SEC13-213	ENST00000445064	PRCD	Q00LT1	54 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms