RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PPP5CP53041 499 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 SURF2Q15527 256 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-203ENST00000444440 DEFB114Q30KQ6 69 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 PYDC2Q56P42 97 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 LCN12Q6JVE5 192 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 UNQ9165/PRO28630Q6UXU0 137 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 H2BFWTQ7Z2G1 175 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 Q8N402 240 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 OR4D10Q8NGI6 311 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 OR4A16Q8NH70 328 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 ZNF502Q8TBZ5 544 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 QTRT1Q9BXR0 403 aaKnown RBP8.2□□□□□ -1.1
SF3A1-203ENST00000444440 RBM38Q9H0Z9 239 aaKnown RBP8.2□□□□□ -1.1
SF3A1-203ENST00000444440 NDUFA4L2Q9NRX3 87 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 THYN1Q9P016 225 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 PEMTQ9UBM1 199 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 IGHV3-21A0A0B4J1V1 117 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 IGHV3-35A0A0C4DH35 117 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 C3orf85A0A1B0GTC6 90 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 F8W735 103 aaPredicted RBP8.19□□□□□ -1.1
SF3A1-203ENST00000444440 H0Y980 276 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 LGALS9O00182 355 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 CTSDP07339 412 aaPredicted RBP8.19□□□□□ -1.1
SF3A1-203ENST00000444440 PI3P19957 117 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 GPR183P32249 361 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 AP3S2P59780 193 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 SPANXN2Q5MJ10 180 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 GPHB5Q86YW7 130 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 OR4C16Q8NGL9 310 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 OR13C8Q8NGS7 320 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 MARCH1Q8TCQ1 289 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 EEF1AKMT3Q96AZ1 226 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 WDR89Q96FK6 387 aaPredicted RBP8.19□□□□□ -1.1
SF3A1-203ENST00000444440 TMEM56Q96MV1 263 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 PLEKHA3Q9HB20 300 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 MLXQ9UH92 298 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 OR51B2Q9Y5P1 312 aa8.19□□□□□ -1.1
SF3A1-203ENST00000444440 TEX13DA0A0J9YY54 714 aaPredicted RBP8.18□□□□□ -1.1
SF3A1-203ENST00000444440 OR13C7P0DN81 318 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 CBLN1P23435 193 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 HAGHQ16775 308 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 IZUMO4Q1ZYL8 232 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 GDPD1Q8N9F7 314 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 OR51S1Q8NGJ8 323 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 OR5B3Q8NH48 314 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 MRGPRFQ96AM1 343 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 SEC22AQ96IW7 307 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 HINT2Q9BX68 163 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 RETNQ9HD89 108 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 MCUBQ9NWR8 336 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 KCNIP3Q9Y2W7 256 aa8.18□□□□□ -1.1
SF3A1-203ENST00000444440 TRBV7-1A0A0A6YYK4 115 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
SF3A1-203ENST00000444440 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
SF3A1-203ENST00000444440 C15orf61A6NNL5 157 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 A8MWP6 167 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 CLEC3BP05452 202 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
SF3A1-203ENST00000444440 CD81P60033 236 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 DHODHQ02127 395 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 TRIM16LQ309B1 348 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 FAAP20Q6NZ36 180 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 LINC00322Q6ZN03 302 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-203ENST00000444440 SGPP2Q8IWX5 399 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 TMEM61Q8N0U2 210 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 TOMM5Q8N4H5 51 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 DEFB125Q8N687 156 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 OR1L6Q8NGR2 347 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 OR2K2Q8NGT1 345 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 DYNLRB2Q8TF09 96 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 DEDD2Q8WXF8 326 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 LSM10Q969L4 123 aaKnown RBP8.17□□□□□ -1.1
SF3A1-203ENST00000444440 RRNAD1Q96FB5 475 aaKnown RBP8.17□□□□□ -1.1
SF3A1-203ENST00000444440 CXorf58Q96LI9 332 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 TP53RKQ96S44 253 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 NEURL2Q9BR09 285 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 TMEM14BQ9NUH8 114 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 GAR1Q9NY12 217 aaKnown RBP8.17□□□□□ -1.1
SF3A1-203ENST00000444440 SLC2A8Q9NY64 477 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 GPR132Q9UNW8 380 aa8.17□□□□□ -1.1
SF3A1-203ENST00000444440 F11RQ9Y624 299 aaKnown RBP8.17□□□□□ -1.1
SF3A1-203ENST00000444440 ALMS1Q8TCU4 4167 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 ZNF320A2RRD8 509 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 OR2T8A6NH00 312 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 K7EIM0 57 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 ETV6P41212 452 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 INPP1P49441 399 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 AKR1C2P52895 323 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 SP6Q3SY56 376 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 SLC25A24Q6NUK1 477 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 BTNL8Q6UX41 500 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 CCDC190Q86UF4 302 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 GTSCR1Q86UQ5 136 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 UXS1Q8NBZ7 420 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 RNASE11Q8TAA1 199 aaKnown RBP8.16□□□□□ -1.1
SF3A1-203ENST00000444440 MUC7Q8TAX7 377 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 RTBDNQ9BSG5 229 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-203ENST00000444440 CHRDL1Q9BU40 450 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 ZNF436Q9C0F3 470 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms