RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 TNFAIP6P98066 277 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 PRCDQ00LT1 54 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 ZADH2Q8N4Q0 377 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 DEFB124Q8NES8 71 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 CMTM2Q8TAZ6 248 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 ZCCHC14Q8WYQ9 949 aaKnown RBP13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 NABP2Q9BQ15 211 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 IL19Q9UHD0 177 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 BOD1L1Q8NFC6 3051 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 KIR2DL5BA0A0G2JN68 375 aa13.5□□□□□ -0.25
SEMA3B-207ENST00000441915 KIR2DL5BA0A0G2JPC4 375 aa13.5□□□□□ -0.25
SEMA3B-207ENST00000441915 GRIFINA4D1Z8 144 aa13.5□□□□□ -0.25
SEMA3B-207ENST00000441915 NUPR1O60356 82 aa13.5□□□□□ -0.25
SEMA3B-207ENST00000441915 SELENOTP62341 195 aa13.5□□□□□ -0.25
SEMA3B-207ENST00000441915 RTL8BQ17RB0 113 aa13.5□□□□□ -0.25
SEMA3B-207ENST00000441915 C3orf36Q3SXR2 165 aa13.5□□□□□ -0.25
SEMA3B-207ENST00000441915 MRPL52Q86TS9 123 aaKnown RBP13.5□□□□□ -0.25
SEMA3B-207ENST00000441915 KIR2DL5AQ8N109 375 aa13.5□□□□□ -0.25
SEMA3B-207ENST00000441915 PIP4P1Q86T03 277 aa13.5□□□□□ -0.25
SEMA3B-207ENST00000441915 SLC35D1Q9NTN3 355 aa13.5□□□□□ -0.25
SEMA3B-207ENST00000441915 TNCP24821 2201 aa13.5□□□□□ -0.25
SEMA3B-207ENST00000441915 SPAARA0A1B0GVQ0 90 aa13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 HELTA6NFD8 242 aa13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 UPK2O00526 184 aa13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 IGKV1-16P04430 117 aa13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 COL8A2P25067 703 aa13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 GAFA1Q96PS6 74 aa13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 CCL13Q99616 98 aa13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 MRPL18Q9H0U6 180 aaKnown RBP13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 TM4SF5O14894 197 aa13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 GNG4P50150 75 aa13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 RPEL1Q2QD12 228 aa13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 TECRQ9NZ01 308 aaKnown RBP13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 NAGKQ9UJ70 344 aa13.49□□□□□ -0.25
SEMA3B-207ENST00000441915 IGHV1-46P01743 117 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 CT45A6P0DMU7 189 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 CT45A5P0DMU8 189 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 CT45A7P0DMV0 189 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 CRISP2P16562 243 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 SAPCD1Q5SSQ6 148 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 ZNF705AQ6ZN79 300 aaPredicted RBP13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 PQLC2Q6ZP29 291 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 SLC25A48Q6ZT89 311 aaKnown RBP13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 MMD2Q8IY49 270 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 FAM122AQ96E09 287 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 YLPM1P49750 1951 aaKnown RBP13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 PLCE1Q9P212 2302 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 MMP23AO75900 390 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 TNFSF4P23510 183 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 CRYBB3P26998 211 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 OR10J1P30954 320 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 ATP5IP56385 69 aaPredicted RBP13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 LGALS4P56470 323 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 TMEM30BQ3MIR4 351 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 ZNF788Q6ZQV5 615 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 MOB3BQ86TA1 216 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 FAM216BQ8N7L0 139 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 SLC35E1Q96K37 410 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 LINC00574Q9H8X3 128 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 RPUSD1Q9UJJ7 312 aaKnown RBP13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 POLR3KQ9Y2Y1 108 aaPredicted RBP13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 IGKV1OR2-108A0A075B7D4 117 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 SRRM4A7MD48 611 aaKnown RBP13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 FCN1O00602 326 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 OR7C2O60412 319 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 OR5I1Q13606 314 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 CENPWQ5EE01 88 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 RPRMLQ8N4K4 120 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 OR1L6Q8NGR2 347 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 C19orf24Q9BVV8 132 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 LPAR2Q9HBW0 351 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 FAM215AQ9Y5M1 114 aa13.48□□□□□ -0.25
SEMA3B-207ENST00000441915 TEX50A0A1B0GTY4 177 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 CEACAM4O75871 244 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 IRF2P14316 349 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 TPPP2P59282 170 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 TAS2R45P59539 299 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 PAFAH1B2P68402 229 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 RPL19P84098 196 aaKnown RBP13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 C2orf83Q53S99 150 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 OR5B3Q8NH48 314 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 V9GYV3 84 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 CACNA1HO95180 2353 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 GATA2P23769 480 aaPredicted RBP13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 IER3P46695 156 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 KRTCAP3Q53RY4 240 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 BET1LQ9NYM9 111 aa13.47□□□□□ -0.25
SEMA3B-207ENST00000441915 SNURFLB1AK76 121 aa13.46□□□□□ -0.25
SEMA3B-207ENST00000441915 RANP62826 216 aaKnown RBP13.46□□□□□ -0.25
SEMA3B-207ENST00000441915 TMEM106BQ9NUM4 274 aa13.46□□□□□ -0.25
SEMA3B-207ENST00000441915 TP53TG3Q9ULZ0 132 aa13.46□□□□□ -0.25
SEMA3B-207ENST00000441915 hADV38S2A0JD32 116 aa13.46□□□□□ -0.26
SEMA3B-207ENST00000441915 ZNF705FA8MVS1 300 aaPredicted RBP13.46□□□□□ -0.26
SEMA3B-207ENST00000441915 ZNF705DP0CH99 300 aaPredicted RBP13.46□□□□□ -0.26
SEMA3B-207ENST00000441915 ZNF705BP0CI00 300 aaPredicted RBP13.46□□□□□ -0.26
SEMA3B-207ENST00000441915 TIGITQ495A1 244 aa13.46□□□□□ -0.26
SEMA3B-207ENST00000441915 RAI1Q7Z5J4 1906 aaPredicted RBP13.45□□□□□ -0.26
SEMA3B-207ENST00000441915 TRBV9A0A0B4J1U6 114 aa13.45□□□□□ -0.26
SEMA3B-207ENST00000441915 SAA1P0DJI8 122 aaPredicted RBP13.45□□□□□ -0.26
SEMA3B-207ENST00000441915 BRS3P32247 399 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms