RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ZNF728P0DKX0 622 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 IMPA1P29218 277 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 TAF6P49848 677 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 ZNF83P51522 516 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 UBE2NP61088 152 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 HBG1P69891 147 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 HBG2P69892 147 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 EIF3IQ13347 325 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 SLC25A30Q5SVS4 291 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 DGAT2L6Q6ZPD8 337 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 TMEM179BQ7Z7N9 219 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 RHOXF1Q8NHV9 184 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 TYMSOSQ8TAI1 123 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 LRRC29Q8WV35 223 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 GEMIN6Q8WXD5 167 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 STARD4Q96DR4 205 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 HYLS1Q96M11 299 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 OR4C12Q96R67 309 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 MIEN1Q9BRT3 115 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 GABARAPL3Q9BY60 117 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 KCNIP2Q9NS61 270 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 CA10Q9NS85 328 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 DNAJC27Q9NZQ0 273 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 MTFP1Q9UDX5 166 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 AP4S1Q9Y587 144 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 SCN2AQ99250 2005 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 MYH7BA7E2Y1 1941 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 A0A1W2PRS3 328 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 PLAC8L1A1L4L8 177 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 OVOL1O14753 267 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 OR2A4O95047 310 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 HSPB1P04792 205 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 MRPL3P09001 348 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 ZNF883P0CG24 379 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 CTLA4P16410 223 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 TGFBR1P36897 503 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 ATP5G3P48201 142 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 UBA52P62987 128 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 MMDQ15546 238 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 C12orf74Q32Q52 190 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 MEIG1Q5JSS6 88 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 ALKAL2Q6UX46 152 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 FOXI2Q6ZQN5 318 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 ZNF429Q86V71 674 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 C11orf53Q8IXP5 236 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 SLC35G3Q8N808 338 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 CT55Q8WUE5 264 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 MAGOHBQ96A72 148 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 OR2A7Q96R45 310 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 SDF2Q99470 211 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 PITX2Q99697 317 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 SAMD10Q9BYL1 202 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 SLIRPQ9GZT3 109 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 PDFQ9HBH1 243 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 NOX3Q9HBY0 568 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 RBM12B-AS1Q9P1G2 102 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 PCYOX1Q9UHG3 505 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 CYSLTR1Q9Y271 337 aa2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 SOX21Q9Y651 276 aaPredicted RBP2.97□□□□□ -1.93
CDC42BPA-207ENST00000441725 ATP7BP35670 1465 aa2.96□□□□□ -1.93
CDC42BPA-207ENST00000441725 RANBP2P49792 3224 aaKnown RBP2.96□□□□□ -1.93
CDC42BPA-207ENST00000441725 LOXHD1Q8IVV2 1947 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 EIF2AK4Q9P2K8 1649 aaKnown RBP2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 NUP210Q8TEM1 1887 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 NFASCO94856 1347 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 ARHGEF5Q12774 1597 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 A0A1B0GV50 99 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 C7orf71A4D174 169 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 ZNF670-ZNF695F2Z2N8 137 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 J3QQQ9 107 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 GPX1P07203 203 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 CD14P08571 375 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 P0C879 139 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 PFN2P35080 140 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 GRB2P62993 217 aaKnown RBP2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 CATR1Q13166 79 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 KHDC3LQ587J8 217 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 TSPO2Q5TGU0 170 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 TMEM244Q5VVB8 128 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 ZNF695Q8IW36 515 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 C20orf196Q8IYI0 205 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 HIST3H2BBQ8N257 126 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 SLC25A45Q8N413 288 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 ZNF525Q8N782 197 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 OR51T1Q8NGJ9 327 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 TMEM106AQ96A25 262 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 TMEM230Q96A57 120 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 FAM3DQ96BQ1 224 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 FXYD5Q96DB9 178 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 SLC25A44Q96H78 314 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 GGTLC1Q9BX51 225 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 NUFIP1Q9UHK0 495 aaKnown RBP2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 ZNF443Q9Y2A4 671 aaPredicted RBP2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 PARP4Q9UKK3 1724 aaKnown RBP2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 PIEZO1Q92508 2521 aa2.96□□□□□ -1.94
CDC42BPA-207ENST00000441725 A6NDN8 102 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 LY6LH3BQJ8 138 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 XKRYO14609 159 aa2.95□□□□□ -1.94
CDC42BPA-207ENST00000441725 OR2T1O43869 369 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms