RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 DNAH11Q96DT5 4516 aa14.97□□□□□ -0.01
TRIM39-210ENST00000440271 IGHV4-4A0A075B6R2 117 aa14.97□□□□□ -0.01
TRIM39-210ENST00000440271 IGHV3OR16-13A0A075B7E8 117 aa14.97□□□□□ -0.01
TRIM39-210ENST00000440271 TRAV14DV4A0A0A6YYC5 116 aa14.97□□□□□ -0.01
TRIM39-210ENST00000440271 IGHV3-74A0A0B4J1X5 117 aa14.97□□□□□ -0.01
TRIM39-210ENST00000440271 PRSS29PA6NIE9 313 aa14.97□□□□□ -0.01
TRIM39-210ENST00000440271 RBMY1A1P0DJD3 496 aaKnown RBP14.97□□□□□ -0.01
TRIM39-210ENST00000440271 RBMY1CP0DJD4 496 aa14.97□□□□□ -0.01
TRIM39-210ENST00000440271 PAFAH1B2P68402 229 aa14.97□□□□□ -0.01
TRIM39-210ENST00000440271 RBMY1FQ15415 496 aaKnown RBP14.97□□□□□ -0.01
TRIM39-210ENST00000440271 BEST4Q8NFU0 473 aa14.97□□□□□ -0.01
TRIM39-210ENST00000440271 OR51H1Q8NH63 302 aa14.97□□□□□ -0.01
TRIM39-210ENST00000440271 TRAV10A0A0B4J240 114 aa14.96□□□□□ -0.01
TRIM39-210ENST00000440271 TRDV1A0A1B0GX56 115 aa14.96□□□□□ -0.01
TRIM39-210ENST00000440271 SMIM30A4D0T7 59 aa14.96□□□□□ -0.01
TRIM39-210ENST00000440271 NUPL2O15504 423 aaKnown RBP14.96□□□□□ -0.01
TRIM39-210ENST00000440271 SCGNO76038 276 aa14.96□□□□□ -0.01
TRIM39-210ENST00000440271 LEMD1Q68G75 181 aa14.96□□□□□ -0.01
TRIM39-210ENST00000440271 ZNF818PQ6ZRF7 136 aa14.96□□□□□ -0.01
TRIM39-210ENST00000440271 TCF24Q7RTU0 167 aa14.96□□□□□ -0.01
TRIM39-210ENST00000440271 DGCR14Q96DF8 476 aaKnown RBP14.96□□□□□ -0.01
TRIM39-210ENST00000440271 COMMD9Q9P000 198 aa14.96□□□□□ -0.01
TRIM39-210ENST00000440271 IGHV4-28A0A0C4DH34 117 aa14.95□□□□□ -0.02
TRIM39-210ENST00000440271 FXYD4P59646 89 aa14.95□□□□□ -0.02
TRIM39-210ENST00000440271 DEFB131AP59861 70 aa14.95□□□□□ -0.02
TRIM39-210ENST00000440271 AADACL3Q5VUY0 350 aa14.95□□□□□ -0.02
TRIM39-210ENST00000440271 Q6ZTC4 211 aa14.95□□□□□ -0.02
TRIM39-210ENST00000440271 EBAG9O00559 213 aa14.94□□□□□ -0.02
TRIM39-210ENST00000440271 RTL8CO15255 209 aa14.94□□□□□ -0.02
TRIM39-210ENST00000440271 DFFBO76075 338 aa14.94□□□□□ -0.02
TRIM39-210ENST00000440271 CD5P06127 495 aa14.94□□□□□ -0.02
TRIM39-210ENST00000440271 ERVK-16P61578 105 aa14.94□□□□□ -0.02
TRIM39-210ENST00000440271 C22orf42Q6IC83 251 aa14.94□□□□□ -0.02
TRIM39-210ENST00000440271 NDUFB11Q9NX14 153 aa14.94□□□□□ -0.02
TRIM39-210ENST00000440271 NSG2Q9Y328 171 aa14.94□□□□□ -0.02
TRIM39-210ENST00000440271 OR51B2Q9Y5P1 312 aa14.94□□□□□ -0.02
TRIM39-210ENST00000440271 MARCH11A6NNE9 402 aa14.93□□□□□ -0.02
TRIM39-210ENST00000440271 NOTOA8MTQ0 251 aa14.93□□□□□ -0.02
TRIM39-210ENST00000440271 GIG44P09565 113 aaPredicted RBP14.93□□□□□ -0.02
TRIM39-210ENST00000440271 PVRIGQ6DKI7 326 aa14.93□□□□□ -0.02
TRIM39-210ENST00000440271 ZNF367Q7RTV3 350 aa14.93□□□□□ -0.02
TRIM39-210ENST00000440271 HOGA1Q86XE5 327 aa14.93□□□□□ -0.02
TRIM39-210ENST00000440271 SLC25A46Q96AG3 418 aa14.93□□□□□ -0.02
TRIM39-210ENST00000440271 RNF126Q9BV68 326 aa14.93□□□□□ -0.02
TRIM39-210ENST00000440271 NXF2Q9GZY0 626 aaKnown RBP14.93□□□□□ -0.02
TRIM39-210ENST00000440271 MS4A6AQ9H2W1 248 aa14.93□□□□□ -0.02
TRIM39-210ENST00000440271 DNASE2O00115 360 aaPredicted RBP14.92□□□□□ -0.02
TRIM39-210ENST00000440271 MIFP14174 115 aa14.92□□□□□ -0.02
TRIM39-210ENST00000440271 MFAP4P55083 255 aa14.92□□□□□ -0.02
TRIM39-210ENST00000440271 STHQ8IWL8 128 aa14.92□□□□□ -0.02
TRIM39-210ENST00000440271 CENPSQ8N2Z9 138 aa14.92□□□□□ -0.02
TRIM39-210ENST00000440271 LILRB2Q8N423 598 aa14.92□□□□□ -0.02
TRIM39-210ENST00000440271 POM121L12Q8N7R1 296 aa14.92□□□□□ -0.02
TRIM39-210ENST00000440271 OR1P1Q8NH06 330 aa14.92□□□□□ -0.02
TRIM39-210ENST00000440271 GIMAP1Q8WWP7 306 aa14.92□□□□□ -0.02
TRIM39-210ENST00000440271 TMEM56Q96MV1 263 aa14.92□□□□□ -0.02
TRIM39-210ENST00000440271 TXN2Q99757 166 aa14.92□□□□□ -0.02
TRIM39-210ENST00000440271 KRTAP4-5Q9BYR2 181 aa14.92□□□□□ -0.02
TRIM39-210ENST00000440271 PKD1P98161 4303 aa14.91□□□□□ -0.02
TRIM39-210ENST00000440271 I3L2K1 104 aa14.91□□□□□ -0.02
TRIM39-210ENST00000440271 SNAPC5O75971 98 aa14.91□□□□□ -0.02
TRIM39-210ENST00000440271 KRASP01116 189 aa14.91□□□□□ -0.02
TRIM39-210ENST00000440271 TBCEQ15813 527 aaPredicted RBP14.91□□□□□ -0.02
TRIM39-210ENST00000440271 TMEM17Q86X19 198 aa14.91□□□□□ -0.02
TRIM39-210ENST00000440271 FAM24BQ8N5W8 94 aa14.91□□□□□ -0.02
TRIM39-210ENST00000440271 ST8SIA2Q92186 375 aa14.91□□□□□ -0.02
TRIM39-210ENST00000440271 VSIRQ9H7M9 311 aa14.91□□□□□ -0.02
TRIM39-210ENST00000440271 DAPK2Q9UIK4 370 aa14.91□□□□□ -0.02
TRIM39-210ENST00000440271 ELOA3CA0A087WX78 387 aaPredicted RBP14.9□□□□□ -0.02
TRIM39-210ENST00000440271 TRAV2A0A0B4J234 112 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 M0R2N4 97 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 ST8SIA3O43173 380 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 APOHP02749 345 aaPredicted RBP14.9□□□□□ -0.02
TRIM39-210ENST00000440271 EIF4EP06730 217 aaKnown RBP14.9□□□□□ -0.02
TRIM39-210ENST00000440271 FCER2P06734 321 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 F2RP25116 425 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 GNRHRP30968 328 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 LPAR6P43657 344 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 TMEM41BQ5BJD5 291 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 CADM3Q8N126 398 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 LGALS14Q8TCE9 139 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 MISP3Q96FF7 219 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 RHBDL2Q9NX52 303 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 X6R8D5 127 aa14.9□□□□□ -0.02
TRIM39-210ENST00000440271 TRAV18A0A075B6X5 111 aa14.89□□□□□ -0.03
TRIM39-210ENST00000440271 ZNF705EA8MWA4 302 aaPredicted RBP14.89□□□□□ -0.03
TRIM39-210ENST00000440271 IGHV3-48P01763 117 aa14.89□□□□□ -0.03
TRIM39-210ENST00000440271 P0DMU3 169 aa14.89□□□□□ -0.03
TRIM39-210ENST00000440271 FAM231AP0DMU4 169 aa14.89□□□□□ -0.03
TRIM39-210ENST00000440271 FAM231CP0DMU5 169 aa14.89□□□□□ -0.03
TRIM39-210ENST00000440271 G6PCP35575 357 aa14.89□□□□□ -0.03
TRIM39-210ENST00000440271 RPL11P62913 178 aaKnown RBP14.89□□□□□ -0.03
TRIM39-210ENST00000440271 TOMM20LQ6UXN7 152 aa14.89□□□□□ -0.03
TRIM39-210ENST00000440271 TRPT1Q86TN4 253 aaKnown RBP14.89□□□□□ -0.03
TRIM39-210ENST00000440271 DUSP18Q8NEJ0 188 aa14.89□□□□□ -0.03
TRIM39-210ENST00000440271 FCAMRQ8WWV6 532 aa14.89□□□□□ -0.03
TRIM39-210ENST00000440271 GINS3Q9BRX5 216 aa14.89□□□□□ -0.03
TRIM39-210ENST00000440271 FKBP11Q9NYL4 201 aa14.89□□□□□ -0.03
TRIM39-210ENST00000440271 PRNDQ9UKY0 176 aa14.89□□□□□ -0.03
TRIM39-210ENST00000440271 IGHV3-66A0A0C4DH42 116 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms