RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 SERTAD4Q9NUC0 356 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 LSM5Q9Y4Y9 91 aaKnown RBP9.97□□□□□ -0.81
SCLT1-202ENST00000439369 FBXO24O75426 580 aa9.96□□□□□ -0.82
SCLT1-202ENST00000439369 NXPH3O95157 252 aa9.96□□□□□ -0.82
SCLT1-202ENST00000439369 IGHG4P01861 327 aa9.96□□□□□ -0.82
SCLT1-202ENST00000439369 SLC25A4P12235 298 aa9.96□□□□□ -0.82
SCLT1-202ENST00000439369 AREGP15514 252 aa9.96□□□□□ -0.82
SCLT1-202ENST00000439369 HIST1H1BP16401 226 aaKnown RBP9.96□□□□□ -0.82
SCLT1-202ENST00000439369 ECSCRQ19T08 205 aa9.96□□□□□ -0.82
SCLT1-202ENST00000439369 C2orf83Q53S99 150 aa9.96□□□□□ -0.82
SCLT1-202ENST00000439369 SLC24A4Q8NFF2 622 aa9.96□□□□□ -0.82
SCLT1-202ENST00000439369 OR1P1Q8NH06 330 aa9.96□□□□□ -0.82
SCLT1-202ENST00000439369 ST6GAL2Q96JF0 529 aa9.96□□□□□ -0.82
SCLT1-202ENST00000439369 RANGRFQ9HD47 186 aaPredicted RBP9.96□□□□□ -0.82
SCLT1-202ENST00000439369 STRAPQ9Y3F4 350 aaKnown RBP9.96□□□□□ -0.82
SCLT1-202ENST00000439369 F11RQ9Y624 299 aaKnown RBP9.96□□□□□ -0.82
SCLT1-202ENST00000439369 TNCP24821 2201 aa9.96□□□□□ -0.82
SCLT1-202ENST00000439369 ANK3Q12955 4377 aaKnown RBP9.96□□□□□ -0.82
SCLT1-202ENST00000439369 CORTO00230 105 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 IGLV1-40P01703 118 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 RNASE2P10153 161 aaKnown RBP9.95□□□□□ -0.82
SCLT1-202ENST00000439369 IAPPP10997 89 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 NPY1RP25929 384 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 P2RY1P47900 373 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 PAX9P55771 341 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 LRRC37A5PQ49AS3 106 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 SPINK9Q5DT21 86 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 C11orf87Q6NUJ2 197 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 LINC01006Q8NI28 216 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 RNASEH2CQ8TDP1 164 aaKnown RBP9.95□□□□□ -0.82
SCLT1-202ENST00000439369 WDR89Q96FK6 387 aaPredicted RBP9.95□□□□□ -0.82
SCLT1-202ENST00000439369 P2RX4Q99571 388 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 RNF126Q9BV68 326 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 SLA2Q9H6Q3 261 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 PSENENQ9NZ42 101 aa9.95□□□□□ -0.82
SCLT1-202ENST00000439369 TRAV14DV4A0A0A6YYC5 116 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 CLPSL1A2RUU4 121 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 PSMB11A5LHX3 300 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 G3V318 75 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 H0YIZ8 118 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 TMEM50AO95807 157 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 IFNA10P01566 189 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 DEFA4P12838 97 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 RAB11AP62491 216 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 FOXE3Q13461 319 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 TMEM65Q6PI78 240 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 RNF152Q8N8N0 203 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 NOL4LQ96MY1 436 aaPredicted RBP9.94□□□□□ -0.82
SCLT1-202ENST00000439369 NEURL2Q9BR09 285 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 LYRM2Q9NU23 88 aaPredicted RBP9.94□□□□□ -0.82
SCLT1-202ENST00000439369 THYN1Q9P016 225 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 MBD2Q9UBB5 411 aa9.94□□□□□ -0.82
SCLT1-202ENST00000439369 TET2Q6N021 2002 aaPredicted RBP9.94□□□□□ -0.82
SCLT1-202ENST00000439369 IGLV11-55A0A075B6I3 123 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 TRBV9A0A0B4J1U6 114 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 FAM223BA6NKX1 122 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 C15orf62A8K5M9 175 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 G3V3Q6 166 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 REG1AP05451 166 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 ELANEP08246 267 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 FOXL1Q12952 345 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 EXOSC2Q13868 293 aaKnown RBP9.93□□□□□ -0.82
SCLT1-202ENST00000439369 TMEM95Q3KNT9 176 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 TEX38Q6PEX7 206 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 TMEM14EPQ6UXP3 125 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 CENPVQ7Z7K6 275 aaPredicted RBP9.93□□□□□ -0.82
SCLT1-202ENST00000439369 FAM223AQ8IWN6 122 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 OR5T1Q8NG75 326 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 WIPF2Q8TF74 440 aaPredicted RBP9.93□□□□□ -0.82
SCLT1-202ENST00000439369 SLC25A31Q9H0C2 315 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 OR5AC2Q9NZP5 309 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 SVEP1Q4LDE5 3571 aa9.93□□□□□ -0.82
SCLT1-202ENST00000439369 HMSDA8MTL9 139 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 SOX15O60248 233 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 C1QBP02746 253 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 OR8U8P0C7N1 319 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 APELAP0DMC3 54 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 PSMB8P28062 276 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 CAV2P51636 162 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 PROK1P58294 105 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 BAXQ07812 192 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 SPANXN5Q5MJ07 72 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 STX12Q86Y82 276 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 NECAP1Q8NC96 275 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 WFDC12Q8WWY7 111 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 DCUN1D4Q92564 292 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 FANCD2OSQ96PS1 177 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 OR4C12Q96R67 309 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 ATP6V0BQ99437 205 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 LINC00527Q9UJ94 153 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 RNF114Q9Y508 228 aa9.92□□□□□ -0.82
SCLT1-202ENST00000439369 RPS10-NUDT3A0A1W2PQS6 291 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 FNDC10F2Z333 226 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 PFDN1O60925 122 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 NUP62P37198 522 aaPredicted RBP9.91□□□□□ -0.82
SCLT1-202ENST00000439369 SULT1A1P50225 295 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 Q5BKY6 102 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 FAM209BQ5JX69 171 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 ETFRF1Q6IPR1 90 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 SLC25A24Q6NUK1 477 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms