RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 NOXA1Q86UR1 476 aa16.32■□□□□ 0.2
CHD3-204ENST00000439235 LFNGQ8NES3 379 aa16.32■□□□□ 0.2
CHD3-204ENST00000439235 LYRM2Q9NU23 88 aaPredicted RBP16.32■□□□□ 0.2
CHD3-204ENST00000439235 STRAPQ9Y3F4 350 aaKnown RBP16.32■□□□□ 0.2
CHD3-204ENST00000439235 TRAV41A0A0B4J266 112 aa16.31■□□□□ 0.2
CHD3-204ENST00000439235 LINC01548A6NM66 108 aa16.31■□□□□ 0.2
CHD3-204ENST00000439235 NPIPB5A8MRT5 1133 aa16.31■□□□□ 0.2
CHD3-204ENST00000439235 H3BP45 60 aa16.31■□□□□ 0.2
CHD3-204ENST00000439235 APELAP0DMC3 54 aa16.31■□□□□ 0.2
CHD3-204ENST00000439235 NPY1RP25929 384 aa16.31■□□□□ 0.2
CHD3-204ENST00000439235 SUB1P53999 127 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHD3-204ENST00000439235 AKIRIN2Q53H80 203 aa16.31■□□□□ 0.2
CHD3-204ENST00000439235 TMEM65Q6PI78 240 aa16.31■□□□□ 0.2
CHD3-204ENST00000439235 Q8N2B8 174 aa16.31■□□□□ 0.2
CHD3-204ENST00000439235 ZNF114Q8NC26 417 aa16.31■□□□□ 0.2
CHD3-204ENST00000439235 SVEP1Q4LDE5 3571 aa16.31■□□□□ 0.2
CHD3-204ENST00000439235 SCAF4O95104 1147 aaKnown RBP16.3■□□□□ 0.2
CHD3-204ENST00000439235 REG1AP05451 166 aa16.3■□□□□ 0.2
CHD3-204ENST00000439235 RAB11AP62491 216 aa16.3■□□□□ 0.2
CHD3-204ENST00000439235 BSXQ3C1V8 233 aa16.3■□□□□ 0.2
CHD3-204ENST00000439235 ASPHD1Q5U4P2 390 aa16.3■□□□□ 0.2
CHD3-204ENST00000439235 Q6ZS46 218 aa16.3■□□□□ 0.2
CHD3-204ENST00000439235 ZNF546Q86UE3 836 aa16.3■□□□□ 0.2
CHD3-204ENST00000439235 TTC9CQ8N5M4 171 aa16.3■□□□□ 0.2
CHD3-204ENST00000439235 FAM110DQ8TAY7 271 aaPredicted RBP16.3■□□□□ 0.2
CHD3-204ENST00000439235 PPP1R14BQ96C90 147 aa16.3■□□□□ 0.2
CHD3-204ENST00000439235 HYLS1Q96M11 299 aa16.3■□□□□ 0.2
CHD3-204ENST00000439235 SLC25A31Q9H0C2 315 aa16.3■□□□□ 0.2
CHD3-204ENST00000439235 HMSDA8MTL9 139 aa16.29■□□□□ 0.2
CHD3-204ENST00000439235 CYB5BO43169 146 aa16.29■□□□□ 0.2
CHD3-204ENST00000439235 CRYGCP07315 174 aa16.29■□□□□ 0.2
CHD3-204ENST00000439235 OR8U8P0C7N1 319 aa16.29■□□□□ 0.2
CHD3-204ENST00000439235 RNASE2P10153 161 aaKnown RBP16.29■□□□□ 0.2
CHD3-204ENST00000439235 CTRB1P17538 263 aa16.29■□□□□ 0.2
CHD3-204ENST00000439235 C2orf83Q53S99 150 aa16.29■□□□□ 0.2
CHD3-204ENST00000439235 CTRB2Q6GPI1 263 aa16.29■□□□□ 0.2
CHD3-204ENST00000439235 STX12Q86Y82 276 aa16.29■□□□□ 0.2
CHD3-204ENST00000439235 INO80EQ8NBZ0 244 aaPredicted RBP16.29■□□□□ 0.2
CHD3-204ENST00000439235 OR1L6Q8NGR2 347 aa16.29■□□□□ 0.2
CHD3-204ENST00000439235 OR2T6Q8NHC8 308 aa16.29■□□□□ 0.2
CHD3-204ENST00000439235 OR4C12Q96R67 309 aa16.29■□□□□ 0.2
CHD3-204ENST00000439235 PAIP2BQ9ULR5 123 aaKnown RBP16.29■□□□□ 0.2
CHD3-204ENST00000439235 TNFSF18Q9UNG2 199 aa16.29■□□□□ 0.2
CHD3-204ENST00000439235 F11RQ9Y624 299 aaKnown RBP16.29■□□□□ 0.2
CHD3-204ENST00000439235 FAM24AA6NFZ4 105 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 C15orf62A8K5M9 175 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 FBXO24O75426 580 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 TSPAN9O75954 239 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 DEFA4P12838 97 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 TMEM14EPQ6UXP3 125 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 Q6ZSV7 163 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 STPG2Q8N412 459 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 TMEM252Q8N6L7 170 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 OR11H4Q8NGC9 324 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 OR1P1Q8NH06 330 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 P2RX4Q99571 388 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 GON7Q9BXV9 100 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 ZC4H2Q9NQZ6 224 aa16.28■□□□□ 0.2
CHD3-204ENST00000439235 G3V318 75 aa16.27■□□□□ 0.2
CHD3-204ENST00000439235 ARPC5O15511 151 aa16.27■□□□□ 0.2
CHD3-204ENST00000439235 RPL12P30050 165 aaKnown RBP16.27■□□□□ 0.2
CHD3-204ENST00000439235 BAXQ07812 192 aa16.27■□□□□ 0.2
CHD3-204ENST00000439235 C19orf54Q5BKX5 351 aa16.27■□□□□ 0.2
CHD3-204ENST00000439235 AQP10Q96PS8 301 aa16.27■□□□□ 0.2
CHD3-204ENST00000439235 TET2Q6N021 2002 aaPredicted RBP16.27■□□□□ 0.2
CHD3-204ENST00000439235 FN1P02751 2386 aaKnown RBP16.26■□□□□ 0.19
CHD3-204ENST00000439235 IGSF23A1L1A6 192 aa16.26■□□□□ 0.19
CHD3-204ENST00000439235 CORTO00230 105 aa16.26■□□□□ 0.19
CHD3-204ENST00000439235 IFNA4P05014 189 aa16.26■□□□□ 0.19
CHD3-204ENST00000439235 METTL15P1P0C7V9 234 aa16.26■□□□□ 0.19
CHD3-204ENST00000439235 HKR1P10072 659 aa16.26■□□□□ 0.19
CHD3-204ENST00000439235 SULT1A1P50225 295 aa16.26■□□□□ 0.19
CHD3-204ENST00000439235 EWSR1Q01844 656 aaKnown RBP eCLIP16.26■□□□□ 0.19
CHD3-204ENST00000439235 TMEM95Q3KNT9 176 aa16.26■□□□□ 0.19
CHD3-204ENST00000439235 OR5T1Q8NG75 326 aa16.26■□□□□ 0.19
CHD3-204ENST00000439235 NOL4LQ96MY1 436 aaPredicted RBP16.26■□□□□ 0.19
CHD3-204ENST00000439235 WNT10AQ9GZT5 417 aa16.26■□□□□ 0.19
CHD3-204ENST00000439235 MFFQ9GZY8 342 aa16.26■□□□□ 0.19
CHD3-204ENST00000439235 LINC00527Q9UJ94 153 aa16.26■□□□□ 0.19
CHD3-204ENST00000439235 NIPBLQ6KC79 2804 aaeCLIP16.25■□□□□ 0.19
CHD3-204ENST00000439235 NDUFA7O95182 113 aa16.25■□□□□ 0.19
CHD3-204ENST00000439235 HNRNPCP07910 306 aaKnown RBP eCLIP16.25■□□□□ 0.19
CHD3-204ENST00000439235 ETV3LQ6ZN32 361 aa16.25■□□□□ 0.19
CHD3-204ENST00000439235 ACOT7LQ6ZUV0 252 aa16.25■□□□□ 0.19
CHD3-204ENST00000439235 RNASEH2CQ8TDP1 164 aaKnown RBP16.25■□□□□ 0.19
CHD3-204ENST00000439235 TNCP24821 2201 aa16.25■□□□□ 0.19
CHD3-204ENST00000439235 H3BUA1 57 aa16.24■□□□□ 0.19
CHD3-204ENST00000439235 HIST1H1BP16401 226 aaKnown RBP16.24■□□□□ 0.19
CHD3-204ENST00000439235 HBG1P69891 147 aa16.24■□□□□ 0.19
CHD3-204ENST00000439235 HBG2P69892 147 aa16.24■□□□□ 0.19
CHD3-204ENST00000439235 SLC35B1P78383 322 aa16.24■□□□□ 0.19
CHD3-204ENST00000439235 OR2F1Q13607 317 aa16.24■□□□□ 0.19
CHD3-204ENST00000439235 PVRIGQ6DKI7 326 aa16.24■□□□□ 0.19
CHD3-204ENST00000439235 SLC25A24Q6NUK1 477 aa16.24■□□□□ 0.19
CHD3-204ENST00000439235 OR10P1Q8NGE3 313 aa16.24■□□□□ 0.19
CHD3-204ENST00000439235 TMEM170AQ8WVE7 144 aa16.24■□□□□ 0.19
CHD3-204ENST00000439235 C16orf95Q9H693 158 aa16.24■□□□□ 0.19
CHD3-204ENST00000439235 HSPB11Q9Y547 144 aa16.24■□□□□ 0.19
CHD3-204ENST00000439235 NSD1Q96L73 2696 aaPredicted RBP16.24■□□□□ 0.19
CHD3-204ENST00000439235 RNF222A6NCQ9 220 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms