RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 IGHV3-7P01780 117 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 IGHV3-43DP0DP04 118 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 CEBPDP49716 269 aaPredicted RBP13.2□□□□□ -0.3
DHFR-201ENST00000439211 PRR31Q5SQ13 230 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 OR4A5Q8NH83 315 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 GEMIN7Q9H840 131 aaKnown RBP13.2□□□□□ -0.3
DHFR-201ENST00000439211 SAP30LQ9HAJ7 183 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 GPR6P46095 362 aaPredicted RBP13.2□□□□□ -0.3
DHFR-201ENST00000439211 ODF3L1Q8IXM7 274 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 TRIB1Q96RU8 372 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 RNASE7Q9H1E1 156 aaKnown RBP13.2□□□□□ -0.3
DHFR-201ENST00000439211 OR2D2Q9H210 308 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 FZR1Q9UM11 496 aa13.2□□□□□ -0.3
DHFR-201ENST00000439211 TRAV9-1A0A075B6T8 112 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 HELTA6NFD8 242 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 MLNRO43193 412 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 G6PCP35575 357 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 HIST1H1AQ02539 215 aaPredicted RBP13.19□□□□□ -0.3
DHFR-201ENST00000439211 Q0VFX4 171 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 CATR1Q13166 79 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 C20orf204Q6ZNR8 217 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 PQLC2Q6ZP29 291 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 SLC25A40Q8TBP6 338 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 POLDIP2Q9Y2S7 368 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 RIF1Q5UIP0 2472 aaKnown RBP13.19□□□□□ -0.3
DHFR-201ENST00000439211 CPAMD8Q8IZJ3 1885 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 LGALS4P56470 323 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 SLAQ13239 276 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 PRAMEF5Q5TYX0 476 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 PRAMEF6Q5VXH4 476 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 TPRX1Q8N7U7 411 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 MAP1LC3CQ9BXW4 147 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 ARRDC1-AS1Q9H2J1 176 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 LYZL6O75951 148 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 CYC1P08574 325 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 H2BFWTQ7Z2G1 175 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 SCCPDHQ8NBX0 429 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 SSBP3Q9BWW4 388 aaPredicted RBP13.19□□□□□ -0.3
DHFR-201ENST00000439211 PLSCR4Q9NRQ2 329 aa13.19□□□□□ -0.3
DHFR-201ENST00000439211 ACTL6BO94805 426 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 CA1P00915 261 aaPredicted RBP13.18□□□□□ -0.3
DHFR-201ENST00000439211 CELA3BP08861 270 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 Q6ZRM9 215 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 TIMM9Q9Y5J7 89 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 MPC1Q9Y5U8 109 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 MED12LQ86YW9 2145 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 SPTBN1Q01082 2364 aaKnown RBP13.18□□□□□ -0.3
DHFR-201ENST00000439211 CLEC3BP05452 202 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 CSN3P07498 182 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 RHOBP62745 196 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 TMEM97Q5BJF2 176 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 TRAT1Q6PIZ9 186 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 ASCL4Q6XD76 172 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 MDP1Q86V88 176 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 OR4F17Q8NGA8 305 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 NPCDR1Q9BY65 106 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 GNG12Q9UBI6 72 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 RALYQ9UKM9 306 aaKnown RBP13.18□□□□□ -0.3
DHFR-201ENST00000439211 IGKV1-6A0A0C4DH72 117 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 RPL8P62917 257 aaKnown RBP13.18□□□□□ -0.3
DHFR-201ENST00000439211 MEF2CQ06413 473 aaPredicted RBP13.18□□□□□ -0.3
DHFR-201ENST00000439211 Q8N976 141 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 OR4P4Q8NGL7 312 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 GALMQ96C23 342 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 TTTY12Q9BZ98 90 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 C11orf1Q9H5F2 150 aa13.18□□□□□ -0.3
DHFR-201ENST00000439211 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
DHFR-201ENST00000439211 A0A0G2JLM5 398 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A10PA6NDY2 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A18PA6NE21 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A16PA6NEW6 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A20PA6NIJ5 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A8PA6NJQ4 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A7PA6NKC0 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A22PA8MWA6 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A12PA8MX19 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A5PA8MXJ8 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A23PA8MXZ1 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 TMPRSS2O15393 492 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A15PP0C7V4 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A13PP0C7W8 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A14PP0C7W9 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FAM90A24PP0C7X0 464 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FOXA3P55318 350 aaPredicted RBP13.17□□□□□ -0.3
DHFR-201ENST00000439211 DEFB123Q8N688 67 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 SSMEM1Q8WWF3 244 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 KLRC4-KLRK1H3BQV0 150 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 RAMP3O60896 148 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 OR2H2O95918 312 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 MT-CO3P00414 261 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 TM4SF20Q53R12 229 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 WDR82Q6UXN9 313 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 FGFRL1Q8N441 504 aa13.17□□□□□ -0.3
DHFR-201ENST00000439211 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.16□□□□□ -0.3
DHFR-201ENST00000439211 J3QT63 122 aa13.16□□□□□ -0.3
DHFR-201ENST00000439211 TIMM8AO60220 97 aaPredicted RBP13.16□□□□□ -0.3
DHFR-201ENST00000439211 CNIH1O95406 144 aa13.16□□□□□ -0.3
DHFR-201ENST00000439211 MEOX1P50221 254 aa13.16□□□□□ -0.3
DHFR-201ENST00000439211 FA2HQ7L5A8 372 aa13.16□□□□□ -0.3
DHFR-201ENST00000439211 NPVFQ9HCQ7 196 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms