RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 WT1P19544 449 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-205ENST00000439160 ZNF343Q6P1L6 599 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 C20orf204Q6ZNR8 217 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 C11orf42Q8N5U0 333 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 IGHV3OR16-8A0A075B7F1 116 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 TRAV34A0A0B4J273 112 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 IGHV3-23P01764 117 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 GCHFRP30047 84 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 IBA57Q5T440 356 aaKnown RBP10.22□□□□□ -0.77
TCOF1-205ENST00000439160 UNQ6494/PRO21346Q6UXR6 183 aa10.22□□□□□ -0.77
TCOF1-205ENST00000439160 LY6HO94772 140 aa10.21□□□□□ -0.77
TCOF1-205ENST00000439160 RPL30P62888 115 aaKnown RBP10.21□□□□□ -0.77
TCOF1-205ENST00000439160 PRSS33Q8NF86 280 aa10.21□□□□□ -0.77
TCOF1-205ENST00000439160 NEUROG1Q92886 237 aa10.21□□□□□ -0.77
TCOF1-205ENST00000439160 RPUSD1Q9UJJ7 312 aaKnown RBP10.21□□□□□ -0.77
TCOF1-205ENST00000439160 K7ENP7 123 aa10.21□□□□□ -0.77
TCOF1-205ENST00000439160 BMPR1BO00238 502 aa10.21□□□□□ -0.77
TCOF1-205ENST00000439160 LINC00205P59089 165 aa10.21□□□□□ -0.77
TCOF1-205ENST00000439160 Q6P435 159 aa10.21□□□□□ -0.77
TCOF1-205ENST00000439160 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.21□□□□□ -0.77
TCOF1-205ENST00000439160 GBGT1Q8N5D6 347 aa10.21□□□□□ -0.77
TCOF1-205ENST00000439160 LRTM2Q8N967 370 aa10.21□□□□□ -0.77
TCOF1-205ENST00000439160 OR9G9P0C7N8 305 aa10.21□□□□□ -0.78
TCOF1-205ENST00000439160 OR4D5Q8NGN0 318 aa10.21□□□□□ -0.78
TCOF1-205ENST00000439160 COQ2Q96H96 371 aa10.21□□□□□ -0.78
TCOF1-205ENST00000439160 C1orf147Q96MC9 270 aaPredicted RBP10.21□□□□□ -0.78
TCOF1-205ENST00000439160 C7orf69Q9H7B7 122 aa10.21□□□□□ -0.78
TCOF1-205ENST00000439160 THBDP07204 575 aa10.21□□□□□ -0.78
TCOF1-205ENST00000439160 TDGF1P13385 188 aa10.21□□□□□ -0.78
TCOF1-205ENST00000439160 ATP5IP56385 69 aaPredicted RBP10.21□□□□□ -0.78
TCOF1-205ENST00000439160 LINC00305Q7Z4B0 112 aa10.21□□□□□ -0.78
TCOF1-205ENST00000439160 METTL26Q96S19 204 aa10.21□□□□□ -0.78
TCOF1-205ENST00000439160 IGHV3-49A0A0A0MS15 119 aa10.2□□□□□ -0.78
TCOF1-205ENST00000439160 TGIF2-C20orf24A0A0A6YYL0 155 aa10.2□□□□□ -0.78
TCOF1-205ENST00000439160 VAMP8Q9BV40 100 aa10.2□□□□□ -0.78
TCOF1-205ENST00000439160 UPK2O00526 184 aa10.2□□□□□ -0.78
TCOF1-205ENST00000439160 HOXA4Q00056 320 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-205ENST00000439160 ADIPOQQ15848 244 aa10.2□□□□□ -0.78
TCOF1-205ENST00000439160 CYP2G1PQ6ZSU1 146 aa10.2□□□□□ -0.78
TCOF1-205ENST00000439160 EIF4E3Q8N5X7 224 aaKnown RBP10.2□□□□□ -0.78
TCOF1-205ENST00000439160 ATRXP46100 2492 aa10.2□□□□□ -0.78
TCOF1-205ENST00000439160 IGKV1D-17A0A075B6S4 117 aa10.2□□□□□ -0.78
TCOF1-205ENST00000439160 GNLYP22749 145 aa10.2□□□□□ -0.78
TCOF1-205ENST00000439160 C16orf92Q96LL3 132 aa10.2□□□□□ -0.78
TCOF1-205ENST00000439160 REG4Q9BYZ8 158 aa10.2□□□□□ -0.78
TCOF1-205ENST00000439160 ELOA3CA0A087WX78 387 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-205ENST00000439160 CGAP01215 116 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 RIGQ13278 110 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 RNF151Q2KHN1 245 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 C15orf61A6NNL5 157 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 TMEM178BH3BS89 294 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 COX19Q49B96 90 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 WFDC1Q9HC57 220 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 CARHSP1Q9Y2V2 147 aaKnown RBP10.19□□□□□ -0.78
TCOF1-205ENST00000439160 TLN1Q9Y490 2541 aaKnown RBP10.19□□□□□ -0.78
TCOF1-205ENST00000439160 SH2D7A6NKC9 451 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-205ENST00000439160 A8MWL6 223 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 TGFAP01135 160 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 ZNF506Q5JVG8 444 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 ASCL4Q6XD76 172 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 DYNLRB2Q8TF09 96 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 FOXA2Q9Y261 457 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-205ENST00000439160 TRAV30A0A087WSZ9 112 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 RBFOX2O43251 390 aaKnown RBP eCLIP10.19□□□□□ -0.78
TCOF1-205ENST00000439160 TNFSF13O75888 250 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 C10orf55Q5SWW7 151 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 GGACTQ9BVM4 153 aa10.19□□□□□ -0.78
TCOF1-205ENST00000439160 SMAD7O15105 426 aaKnown RBP10.18□□□□□ -0.78
TCOF1-205ENST00000439160 FOSL1P15407 271 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 HERPUD1Q15011 391 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 SRSF7Q16629 238 aaKnown RBP eCLIP10.18□□□□□ -0.78
TCOF1-205ENST00000439160 C19orf24Q9BVV8 132 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 COL25A1Q9BXS0 654 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-205ENST00000439160 HSPB7Q9UBY9 170 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 TMEM250H0YL14 139 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 IGKV1-5P01602 117 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 OR5AL1P0C617 328 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 PAFAH1B2P68402 229 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 TMEM200BQ69YZ2 307 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 HEPN1Q6WQI6 88 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 OBSL1O75147 1896 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 LINC00587B1AMM8 73 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 M0R2Z0 102 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 AGAP20933 346 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 TMEM78Q5T7P6 136 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 IGFL3Q6UXB1 125 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 GOLT1AQ6ZVE7 132 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 PPP1R27Q86WC6 154 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 ISLRO14498 428 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 APCSP02743 223 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 RPL7P18124 248 aaKnown RBP10.18□□□□□ -0.78
TCOF1-205ENST00000439160 KLHDC1Q8N7A1 406 aa10.18□□□□□ -0.78
TCOF1-205ENST00000439160 SRSF12Q8WXF0 261 aaKnown RBP10.18□□□□□ -0.78
TCOF1-205ENST00000439160 TIMM23O14925 209 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 ZNF207O43670 478 aaKnown RBP10.17□□□□□ -0.78
TCOF1-205ENST00000439160 NBL1P41271 181 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 NHLH1Q02575 133 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 ATP5G2Q06055 141 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 OR10W1Q8NGF6 305 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 WNT10AQ9GZT5 417 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms