RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 LSM4Q9Y4Z0 139 aaKnown RBP10.1□□□□□ -0.79
LINC00399-201ENST00000439008 K7EIM0 57 aa10.09□□□□□ -0.79
LINC00399-201ENST00000439008 ST8SIA3O43173 380 aa10.09□□□□□ -0.79
LINC00399-201ENST00000439008 IGLV1-51P01701 117 aa10.09□□□□□ -0.79
LINC00399-201ENST00000439008 HIST1H1BP16401 226 aaKnown RBP10.09□□□□□ -0.79
LINC00399-201ENST00000439008 PRCDQ00LT1 54 aa10.09□□□□□ -0.79
LINC00399-201ENST00000439008 TOMM5Q8N4H5 51 aa10.09□□□□□ -0.79
LINC00399-201ENST00000439008 OR2C3Q8N628 320 aa10.09□□□□□ -0.79
LINC00399-201ENST00000439008 OR4A16Q8NH70 328 aa10.09□□□□□ -0.79
LINC00399-201ENST00000439008 TSC22D3Q99576 134 aa10.09□□□□□ -0.79
LINC00399-201ENST00000439008 SCP2D1Q9UJQ7 156 aa10.09□□□□□ -0.79
LINC00399-201ENST00000439008 ZNF256Q9Y2P7 627 aaPredicted RBP10.09□□□□□ -0.79
LINC00399-201ENST00000439008 IZUMO1RA6ND01 250 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 DHFRP00374 187 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 CLEC3BP05452 202 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 MECP2P51608 486 aaKnown RBP10.08□□□□□ -0.8
LINC00399-201ENST00000439008 AKR1C2P52895 323 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 DEFB121Q5J5C9 76 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 SPANXN2Q5MJ10 180 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 THOC7Q6I9Y2 204 aaKnown RBP10.08□□□□□ -0.8
LINC00399-201ENST00000439008 SLC25A24Q6NUK1 477 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 GPR146Q96CH1 333 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 GALNT14Q96FL9 552 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 TMEM56Q96MV1 263 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 FKBP11Q9NYL4 201 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 NDUFA13Q9P0J0 144 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 SELENOKQ9Y6D0 94 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 TMEM56-RWDD3S4R434 201 aa10.08□□□□□ -0.8
LINC00399-201ENST00000439008 TENM3Q9P273 2699 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 IGHV3-35A0A0C4DH35 117 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 A6NHS1 94 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 IGHV3-48P01763 117 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 AKR1C4P17516 323 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 GPR183P32249 361 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 ARL3P36405 182 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 CCR6P51684 374 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 AARDQ4LEZ3 155 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 TMEM268Q5VZI3 342 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 UNQ9165/PRO28630Q6UXU0 137 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 HSD17B13Q7Z5P4 300 aaPredicted RBP10.07□□□□□ -0.8
LINC00399-201ENST00000439008 SCARB1Q8WTV0 552 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 CACNG8Q8WXS5 425 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 RBPMSQ93062 196 aaKnown RBP10.07□□□□□ -0.8
LINC00399-201ENST00000439008 EEF1AKMT3Q96AZ1 226 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 OR4C12Q96R67 309 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 CHRDL1Q9BU40 450 aa10.07□□□□□ -0.8
LINC00399-201ENST00000439008 TRBV7-1A0A0A6YYK4 115 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 I3L2K1 104 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 GGCTO75223 188 aaKnown RBP10.06□□□□□ -0.8
LINC00399-201ENST00000439008 B3GALNT1O75752 331 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 BTCP35070 178 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 ADMP35318 185 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 DHODHQ02127 395 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 LYZL2Q7Z4W2 148 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 GPHB5Q86YW7 130 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 SGPP2Q8IWX5 399 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 SLC35G3Q8N808 338 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 OR1P1Q8NH06 330 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 VN1R17PQ8TDU5 208 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 CXorf58Q96LI9 332 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 ELOVL1Q9BW60 279 aa10.06□□□□□ -0.8
LINC00399-201ENST00000439008 LINC00854A0A1B0GVQ3 168 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 OR2T8A6NH00 312 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 C2orf70A6NJV1 201 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 LY86O95711 162 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 RNASE2P10153 161 aaKnown RBP10.05□□□□□ -0.8
LINC00399-201ENST00000439008 AP3S2P59780 193 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 ANKRD55Q3KP44 614 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 ZNF57Q68EA5 555 aaPredicted RBP10.05□□□□□ -0.8
LINC00399-201ENST00000439008 PVRIGQ6DKI7 326 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 TMED4Q7Z7H5 227 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 Q8N1Y9 231 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 ZNF114Q8NC26 417 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 RRNAD1Q96FB5 475 aaKnown RBP10.05□□□□□ -0.8
LINC00399-201ENST00000439008 SIGLEC8Q9NYZ4 499 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 CACNG5Q9UF02 275 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 FLVCR2Q9UPI3 526 aa10.05□□□□□ -0.8
LINC00399-201ENST00000439008 STAB2Q8WWQ8 2551 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 TMEM213A2RRL7 107 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 LGALS9O00182 355 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 PLA2G10O15496 165 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 TGOLN2O43493 480 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 NXPH3O95157 252 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 IFNA17P01571 189 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 IL7P13232 177 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 GP9P14770 177 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 FAUP35544 74 aaKnown RBP10.04□□□□□ -0.8
LINC00399-201ENST00000439008 MLANAQ16655 118 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 CNPY1Q3B7I2 92 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 TM4SF20Q53R12 229 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 NMSQ5H8A3 153 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 FAM209BQ5JX69 171 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 TMEM170AQ8WVE7 144 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 MISP3Q96FF7 219 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 PLEKHA3Q9HB20 300 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 C21orf62Q9NYP8 219 aa10.04□□□□□ -0.8
LINC00399-201ENST00000439008 MRPL36Q9P0J6 103 aaKnown RBP10.04□□□□□ -0.8
LINC00399-201ENST00000439008 ATG12O94817 140 aa10.03□□□□□ -0.8
LINC00399-201ENST00000439008 MT-CO2P00403 227 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms