RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 EPRSP07814 1512 aaKnown RBP2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 MAGI3Q5TCQ9 1506 aa2.22□□□□□ -2.05
LSM1P1-201ENST00000438629 ITGB4P16144 1822 aa2.21□□□□□ -2.05
LSM1P1-201ENST00000438629 HECW1Q76N89 1606 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 IGKV1-8A0A0C4DH67 115 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 C5orf49A4QMS7 147 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 C8orf87E5RJ46 101 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 NDUFC2-KCTD14E9PQ53 114 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 MRPS14O60783 128 aaKnown RBP2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 CA2P00918 260 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 APODP05090 189 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 CD2P06729 351 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 SOD3P08294 240 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 SCTP09683 121 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 ZNF688P0C7X2 276 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 FGF6P10767 208 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 GADD45AP24522 165 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 ATP6V0CP27449 155 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 ETV6P41212 452 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 GFERP55789 205 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 DEFA3P59666 94 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 SNRPD2P62316 118 aaKnown RBP2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 HSD52Q0P140 79 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 C12orf74Q32Q52 190 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 MPV17L2Q567V2 206 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 Q5BKY6 102 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 CLLU1OSQ5K130 101 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 BCL2L15Q5TBC7 163 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 NXNL2Q5VZ03 156 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 KDM4DQ6B0I6 523 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 RPL22L1Q6P5R6 122 aaKnown RBP2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 DENND4AQ7Z401 1863 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 SLC35E3Q7Z769 313 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 SGPP2Q8IWX5 399 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 EXOC3-AS1Q8N2X6 119 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 OR4S1Q8NGB4 309 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 OR11G2Q8NGC1 345 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 OR4K5Q8NGD3 323 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 CT55Q8WUE5 264 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 DEDD2Q8WXF8 326 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 PP6455Q8WZ26 134 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 SLAMF6Q96DU3 332 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 MALSU1Q96EH3 234 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 ADAT3Q96EY9 351 aaPredicted RBP2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 TMEM147Q9BVK8 224 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 GNB1LQ9BYB4 327 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 NSD3Q9BZ95 1437 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 COMMD3Q9UBI1 195 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 POMPQ9Y244 141 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 MED31Q9Y3C7 131 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 PCYT1BQ9Y5K3 369 aaPredicted RBP2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 CHD2O14647 1828 aaKnown RBP2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 CTTNBP2Q8WZ74 1663 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 ATG2AQ2TAZ0 1938 aa2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 BAZ2AQ9UIF9 1905 aaKnown RBP2.21□□□□□ -2.06
LSM1P1-201ENST00000438629 MAGI2Q86UL8 1455 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 CEP164Q9UPV0 1460 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 SIPA1L1O43166 1804 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 ECM29Q5VYK3 1845 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 TRAV5A0A0B4J249 113 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 PNMA8CA0A1B0GUJ8 204 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 RPL36A-HNRNPH2H7BZ11 118 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 J3QR89 54 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 AIPO00170 330 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 CXorf1O96002 111 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 PAEPP09466 180 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 AKAIN1P0CW23 69 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 CCL1P22362 96 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 IL3RAP26951 378 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 IMPA1P29218 277 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 PPP1CCP36873 323 aaKnown RBP2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 NDUFA6P56556 154 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 RBM11P57052 281 aaKnown RBP2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 KRTAP10-8P60410 259 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 MEF2BQ02080 365 aaPredicted RBP2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 SLC38A11Q08AI6 406 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 MMDQ15546 238 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 ABCA11PQ4W5N1 156 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 CENPWQ5EE01 88 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 Q5XG85 94 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 ZNF773Q6PK81 442 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 Q6ZR03 302 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 LINC00596Q86U02 117 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 GKN2Q86XP6 184 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 C20orf196Q8IYI0 205 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 ANKRD29Q8N6D5 301 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 FER1L6-AS1Q8NA97 138 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 C5orf17Q8NAS9 161 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 OR52R1Q8NGF1 315 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 OR8A1Q8NGG7 326 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 OR51H1Q8NH63 302 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 S100ZQ8WXG8 99 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 CCL17Q92583 94 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 KLK6Q92876 244 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 KCNS1Q96KK3 526 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 TEX37Q96LM6 180 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 DERL3Q96Q80 235 aa2.2□□□□□ -2.06
LSM1P1-201ENST00000438629 TSPAN32Q96QS1 320 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms