RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 MXD1Q05195 221 aa8.05□□□□□ -1.12
SPTLC1P4-201ENST00000435997 FAM90A2PQ658T7 463 aa8.05□□□□□ -1.12
SPTLC1P4-201ENST00000435997 DHRS11Q6UWP2 260 aa8.05□□□□□ -1.12
SPTLC1P4-201ENST00000435997 ZNF114Q8NC26 417 aa8.05□□□□□ -1.12
SPTLC1P4-201ENST00000435997 OR5B3Q8NH48 314 aa8.05□□□□□ -1.12
SPTLC1P4-201ENST00000435997 PHLDA1Q8WV24 401 aaPredicted RBP8.05□□□□□ -1.12
SPTLC1P4-201ENST00000435997 FCAMRQ8WWV6 532 aa8.05□□□□□ -1.12
SPTLC1P4-201ENST00000435997 RNF2Q99496 336 aa8.05□□□□□ -1.12
SPTLC1P4-201ENST00000435997 FXYD6Q9H0Q3 95 aa8.05□□□□□ -1.12
SPTLC1P4-201ENST00000435997 C11orf68Q9H3H3 251 aaKnown RBP8.05□□□□□ -1.12
SPTLC1P4-201ENST00000435997 SMPXQ9UHP9 88 aa8.05□□□□□ -1.12
SPTLC1P4-201ENST00000435997 IGHV3OR16-8A0A075B7F1 116 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 IGHV3-21A0A0B4J1V1 117 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 DBX1A6NMT0 343 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 C15orf61A6NNL5 157 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 CHEK1O14757 476 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 XRCC3O43542 346 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 PGLYRP1O75594 196 aaPredicted RBP8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 DEDDO75618 318 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 FCER2P06734 321 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 CTSDP07339 412 aaPredicted RBP8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 HERV-K104P61576 105 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 IDNKQ5T6J7 187 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 SLC25A24Q6NUK1 477 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 OR1P1Q8NH06 330 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 GATAD1Q8WUU5 269 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 DGCR14Q96DF8 476 aaKnown RBP8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 C20orf24Q9BUV8 137 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 EHFQ9NZC4 300 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 NSG2Q9Y328 171 aa8.04□□□□□ -1.12
SPTLC1P4-201ENST00000435997 IGHV7-4-1A0A0J9YVY3 117 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 MEIS3P1A6NDR6 274 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 I3L2K1 104 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 ZNF207O43670 478 aaKnown RBP8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 KRASP01116 189 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 NAT1P18440 290 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 G6PCP35575 357 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 RELQ04864 619 aaPredicted RBP8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 ZNF124Q15973 351 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 APRG1Q8IVJ8 170 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 RHPN1-AS1Q9BWJ2 59 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 CSTL1Q9H114 145 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 DIABLOQ9NR28 239 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 FAM212BQ9NTI7 297 aaPredicted RBP8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 PRNDQ9UKY0 176 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 OR51B2Q9Y5P1 312 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 HECTD4Q9Y4D8 3996 aa8.03□□□□□ -1.12
SPTLC1P4-201ENST00000435997 LPAR6P43657 344 aa8.02□□□□□ -1.13
SPTLC1P4-201ENST00000435997 RFX2P48378 723 aa8.02□□□□□ -1.13
SPTLC1P4-201ENST00000435997 Q56UQ5 140 aa8.02□□□□□ -1.13
SPTLC1P4-201ENST00000435997 UBAC2Q8NBM4 344 aa8.02□□□□□ -1.13
SPTLC1P4-201ENST00000435997 TMEM116Q8NCL8 245 aa8.02□□□□□ -1.13
SPTLC1P4-201ENST00000435997 ZNF2Q9BSG1 426 aaPredicted RBP8.02□□□□□ -1.13
SPTLC1P4-201ENST00000435997 YTHDF1Q9BYJ9 559 aaKnown RBP8.02□□□□□ -1.13
SPTLC1P4-201ENST00000435997 C6orf62Q9GZU0 229 aaPredicted RBP8.02□□□□□ -1.13
SPTLC1P4-201ENST00000435997 NXF2Q9GZY0 626 aaKnown RBP8.02□□□□□ -1.13
SPTLC1P4-201ENST00000435997 LOC100506127A0A0U1RQW1 187 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 MPTX1A8MV57 137 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 GPR31O00270 319 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 NUPL2O15504 423 aaKnown RBP8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 SNAPC5O75971 98 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 TAS2R46P59540 309 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 NANOS2P60321 138 aaKnown RBP8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 UBE2NLQ5JXB2 153 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 CMTM1Q8IZ96 169 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 SEC22AQ96IW7 307 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 TMEM56Q96MV1 263 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 TSC22D3Q99576 134 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 TXN2Q99757 166 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 HINT2Q9BX68 163 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 MFFQ9GZY8 342 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 VSIRQ9H7M9 311 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 IFT46Q9NQC8 304 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 FKBP11Q9NYL4 201 aa8.01□□□□□ -1.13
SPTLC1P4-201ENST00000435997 IGKV1-39P01597 117 aa8□□□□□ -1.13
SPTLC1P4-201ENST00000435997 PMP2P02689 132 aa8□□□□□ -1.13
SPTLC1P4-201ENST00000435997 IGKV1D-39P04432 117 aa8□□□□□ -1.13
SPTLC1P4-201ENST00000435997 CMC4P56277 68 aaPredicted RBP8□□□□□ -1.13
SPTLC1P4-201ENST00000435997 TAS2R20P59543 309 aa8□□□□□ -1.13
SPTLC1P4-201ENST00000435997 PRCDQ00LT1 54 aa8□□□□□ -1.13
SPTLC1P4-201ENST00000435997 PVRIGQ6DKI7 326 aa8□□□□□ -1.13
SPTLC1P4-201ENST00000435997 OR5H2Q8NGV7 314 aa8□□□□□ -1.13
SPTLC1P4-201ENST00000435997 OR11H2Q8NH07 326 aa8□□□□□ -1.13
SPTLC1P4-201ENST00000435997 SLC25A46Q96AG3 418 aa8□□□□□ -1.13
SPTLC1P4-201ENST00000435997 RARRES2Q99969 163 aa8□□□□□ -1.13
SPTLC1P4-201ENST00000435997 ZFAND3Q9H8U3 227 aa8□□□□□ -1.13
SPTLC1P4-201ENST00000435997 VPS13DQ5THJ4 4388 aa7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 IGHV3-49A0A0A0MS15 119 aa7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 TRAV14DV4A0A0A6YYC5 116 aa7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 TRAV2A0A0B4J234 112 aa7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 MT-CO2P00403 227 aa7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 CD5P06127 495 aa7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 GIG44P09565 113 aaPredicted RBP7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 HRH1P35367 487 aa7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 MFAP4P55083 255 aa7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 TCTAP57738 103 aa7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 RBMS2Q15434 407 aaKnown RBP7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 TMEM69Q5SWH9 247 aa7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 LYSMD2Q8IV50 215 aa7.99□□□□□ -1.13
SPTLC1P4-201ENST00000435997 CROCCP3Q8IVE0 287 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms