RNA–Protein interactions for RNA: ENST00000432292.7

PMS1-212, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-212ENST00000432292 HSPB7Q9UBY9 170 aa13.49□□□□□ -0.25
PMS1-212ENST00000432292 PRRX1P54821 245 aa13.49□□□□□ -0.25
PMS1-212ENST00000432292 RPEL1Q2QD12 228 aa13.49□□□□□ -0.25
PMS1-212ENST00000432292 NIT1Q86X76 327 aa13.49□□□□□ -0.25
PMS1-212ENST00000432292 OR2Z1Q8NG97 314 aa13.49□□□□□ -0.25
PMS1-212ENST00000432292 OR2T8A6NH00 312 aa13.49□□□□□ -0.25
PMS1-212ENST00000432292 MPV17L2Q567V2 206 aa13.49□□□□□ -0.25
PMS1-212ENST00000432292 NUDT11Q96G61 164 aa13.49□□□□□ -0.25
PMS1-212ENST00000432292 DCTN5Q9BTE1 182 aa13.49□□□□□ -0.25
PMS1-212ENST00000432292 A0A1W2PN81 502 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 CEACAM4O75871 244 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 ZNF474Q6S9Z5 364 aaPredicted RBP13.48□□□□□ -0.25
PMS1-212ENST00000432292 Q6ZS49 121 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 C11orf53Q8IXP5 236 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 WASHC3Q9Y3C0 194 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 FAM215AQ9Y5M1 114 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 RRHO14718 337 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 PPBPP02775 128 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 GABRA2P47869 451 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 LINC00205P59089 165 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 DOLPP1Q86YN1 238 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 RBMXL3Q8N7X1 1067 aaKnown RBP13.48□□□□□ -0.25
PMS1-212ENST00000432292 LIN7CQ9NUP9 197 aaKnown RBP13.48□□□□□ -0.25
PMS1-212ENST00000432292 RELNP78509 3460 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 COL6A6A6NMZ7 2263 aa13.48□□□□□ -0.25
PMS1-212ENST00000432292 ABCA4P78363 2273 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 IGHV3-43A0A0B4J1X8 118 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 IGHV3-43DP0DP04 118 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 ZNF718Q3SXZ3 478 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 SPRNQ5BIV9 151 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 RNASE7Q9H1E1 156 aaKnown RBP13.47□□□□□ -0.25
PMS1-212ENST00000432292 YTHDF2Q9Y5A9 579 aaKnown RBP13.47□□□□□ -0.25
PMS1-212ENST00000432292 TMEM238C9JI98 176 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 S1PR2O95136 353 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 CGAP01215 116 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 IGHV3-13P01766 116 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 IGHV3-7P01780 117 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 IGLL1P15814 213 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 EDDM3AQ14507 147 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 AMMECR1LQ6DCA0 310 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 ZNF497Q6ZNH5 498 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 C22orf34Q6ZV56 151 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 CSTL1Q9H114 145 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 IGHV2-26A0A0B4J1V2 119 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 DEFB108AA8MXU0 73 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 C17orf112F2Z3M2 114 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 ASCL5Q7RTU5 278 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 LINC00596Q86U02 117 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 DRAM1Q8N682 238 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 OR2D3Q8NGH3 330 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 SERTAD4Q9NUC0 356 aa13.47□□□□□ -0.25
PMS1-212ENST00000432292 CHD8Q9HCK8 2581 aa13.46□□□□□ -0.25
PMS1-212ENST00000432292 TRAV30A0A087WSZ9 112 aa13.46□□□□□ -0.25
PMS1-212ENST00000432292 IGLC7A0M8Q6 106 aa13.46□□□□□ -0.25
PMS1-212ENST00000432292 FAM27E3Q08E93 113 aa13.46□□□□□ -0.25
PMS1-212ENST00000432292 FOXC1Q12948 553 aa13.46□□□□□ -0.25
PMS1-212ENST00000432292 OR52L2PQ8NGH6 319 aa13.46□□□□□ -0.25
PMS1-212ENST00000432292 TSKUQ8WUA8 353 aa13.46□□□□□ -0.25
PMS1-212ENST00000432292 SSMEM1Q8WWF3 244 aa13.46□□□□□ -0.25
PMS1-212ENST00000432292 MRPS16Q9Y3D3 137 aaKnown RBP13.46□□□□□ -0.25
PMS1-212ENST00000432292 NCOR2Q9Y618 2525 aa13.46□□□□□ -0.25
PMS1-212ENST00000432292 IGHV1-69-2A0A0G2JMI3 117 aa13.46□□□□□ -0.26
PMS1-212ENST00000432292 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.46□□□□□ -0.26
PMS1-212ENST00000432292 WDR82Q6UXN9 313 aa13.46□□□□□ -0.26
PMS1-212ENST00000432292 WFDC8Q8IUA0 241 aa13.46□□□□□ -0.26
PMS1-212ENST00000432292 IGHV3OR15-7A0A075B7D8 119 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 FAM201AQ5SY85 155 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 MIC13Q5XKP0 118 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 Q8IYB0 196 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 KALRNO60229 2985 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 ZNF146Q15072 292 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 PRR27Q6MZM9 219 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 Q6ZS92 163 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 LRRC29Q8WV35 223 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 NEUROG1Q92886 237 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 CXXC4Q9H2H0 198 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 PMS2P5A8MQ11 134 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 CA1P00915 261 aaPredicted RBP13.45□□□□□ -0.26
PMS1-212ENST00000432292 MORN2Q502X0 79 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 OR2D2Q9H210 308 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 SLC25A15Q9Y619 301 aa13.45□□□□□ -0.26
PMS1-212ENST00000432292 SPRY3O43610 288 aa13.44□□□□□ -0.26
PMS1-212ENST00000432292 NUDT3O95989 172 aa13.44□□□□□ -0.26
PMS1-212ENST00000432292 SSTR5P35346 364 aa13.44□□□□□ -0.26
PMS1-212ENST00000432292 OR4F17Q8NGA8 305 aa13.44□□□□□ -0.26
PMS1-212ENST00000432292 ABHD17AQ96GS6 310 aa13.44□□□□□ -0.26
PMS1-212ENST00000432292 SFXN3Q9BWM7 321 aa13.44□□□□□ -0.26
PMS1-212ENST00000432292 C12orf77C9JDV5 145 aa13.44□□□□□ -0.26
PMS1-212ENST00000432292 J3QW42 95 aa13.44□□□□□ -0.26
PMS1-212ENST00000432292 BMPR1BO00238 502 aa13.44□□□□□ -0.26
PMS1-212ENST00000432292 PDLIM3Q53GG5 364 aaPredicted RBP13.44□□□□□ -0.26
PMS1-212ENST00000432292 MEGF9Q9H1U4 602 aa13.44□□□□□ -0.26
PMS1-212ENST00000432292 MBD3L4A6NDZ8 208 aaPredicted RBP13.43□□□□□ -0.26
PMS1-212ENST00000432292 MBD3L3A6NE82 208 aaPredicted RBP13.43□□□□□ -0.26
PMS1-212ENST00000432292 MBD3L5A6NJ08 208 aaPredicted RBP13.43□□□□□ -0.26
PMS1-212ENST00000432292 LRRC30A6NM36 301 aa13.43□□□□□ -0.26
PMS1-212ENST00000432292 RNF212BA8MTL3 300 aa13.43□□□□□ -0.26
PMS1-212ENST00000432292 SAP30O75446 220 aa13.43□□□□□ -0.26
PMS1-212ENST00000432292 SRSF7Q16629 238 aaKnown RBP eCLIP13.43□□□□□ -0.26
PMS1-212ENST00000432292 SPATA31B1PQ5VZV4 182 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms