RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 PRR13Q9NZ81 148 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 PROCRQ9UNN8 238 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 IQGAP3Q86VI3 1631 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 KNTC1P50748 2209 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 TRBV24-1A0A075B6N3 115 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 HAX1O00165 279 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 PTGESO14684 152 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 PLAUP00749 431 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 GASTP01350 101 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 PYYP10082 97 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 VDAC1P21796 283 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 CD70P32970 193 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 OPRK1P41145 380 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 UBE2E1P51965 193 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 PCBD1P61457 104 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 LAMTOR4Q0VGL1 99 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 ZNF678Q5SXM1 525 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 LINC00305Q7Z4B0 112 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 FAM19A1Q7Z5A9 133 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 PPDPFLQ8WWR9 84 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 UBE2E3Q969T4 207 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 UBE2E2Q96LR5 201 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 IMMP2LQ96T52 175 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 TP73-AS1Q9UF72 201 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 YTHDF2Q9Y5A9 579 aaKnown RBP4.44□□□□□ -1.7
PTPN4-203ENST00000430976 IER3IP1Q9Y5U9 82 aa4.44□□□□□ -1.7
PTPN4-203ENST00000430976 ASCC3Q8N3C0 2202 aaKnown RBP4.44□□□□□ -1.7
PTPN4-203ENST00000430976 TRAV4A0A0B4J268 109 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 FAM157AC9JC47 383 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 OVOL1O14753 267 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 TFF1P04155 84 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 OR9G9P0C7N8 305 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 C3orf79P0CE67 100 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 NHLRC4P0CG21 123 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-203ENST00000430976 RPS4Y1P22090 263 aaKnown RBP4.43□□□□□ -1.7
PTPN4-203ENST00000430976 KIAA0040Q15053 153 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 hDV102S1A0JD36 115 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 CYBAP13498 195 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 HOXB4P17483 251 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-203ENST00000430976 SPSB3Q6PJ21 355 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 ZNF493Q6ZR52 646 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 RNF182Q8N6D2 247 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 TIMM17AQ99595 171 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 ALPK2Q86TB3 2170 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 TRPM6Q9BX84 2022 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 RREB1Q92766 1687 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 RBAKDNA6NC62 111 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 ZNF688P0C7X2 276 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 PSMB2P49721 201 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 TNFAIP6P98066 277 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-203ENST00000430976 C3orf22Q8N5N4 141 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 NUP37Q8NFH4 326 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 DLX4Q92988 240 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-203ENST00000430976 BMFQ96LC9 184 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 YPEL4Q96NS1 127 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 CXCL16Q9H2A7 254 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 MCTS1Q9ULC4 181 aaKnown RBP4.43□□□□□ -1.7
PTPN4-203ENST00000430976 OARD1Q9Y530 152 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 CHCHD2Q9Y6H1 151 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-203ENST00000430976 BAZ2AQ9UIF9 1905 aaKnown RBP4.43□□□□□ -1.7
PTPN4-203ENST00000430976 A0A1B0GTL3 188 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 C17orf100A8MU93 164 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-203ENST00000430976 UPK2O00526 184 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 NUPR1O60356 82 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 BCL2P10415 239 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 CTGFP29279 349 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 FCGR2CP31995 323 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 WDR5P61964 334 aaKnown RBP4.43□□□□□ -1.7
PTPN4-203ENST00000430976 ZNF56Q15929 161 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 Q499Y3 187 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 TECRLQ5HYJ1 363 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 PRR26Q8N8Z3 221 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 OVCA2Q8WZ82 227 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 WDYHV1Q96HA8 205 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 PBOV1Q9GZY1 135 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 OCIAD1Q9NX40 245 aa4.43□□□□□ -1.7
PTPN4-203ENST00000430976 PLAC8L1A1L4L8 177 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 A1L4Q6 167 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 K7EMT4 169 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 UQCRQO14949 82 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 SYNGR2O43760 224 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 CD7P09564 240 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 UFSP1Q6NVU6 142 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 NOXRED1Q6NXP6 359 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 RBM22Q9NW64 420 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTPN4-203ENST00000430976 TRAV8-4A0A0B4J246 113 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 CRYM-AS1A6NIL9 109 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 CD300LBA8K4G0 201 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 CBLN1P23435 193 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 SGSHP51688 502 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 UBE2L3P68036 154 aaKnown RBP4.42□□□□□ -1.7
PTPN4-203ENST00000430976 ARFRP1Q13795 201 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 COA6Q5JTJ3 125 aaKnown RBP4.42□□□□□ -1.7
PTPN4-203ENST00000430976 AAED1Q7RTV5 226 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 TSKUQ8WUA8 353 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 BADQ92934 168 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 METTL26Q96S19 204 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 COMMD5Q9GZQ3 224 aa4.42□□□□□ -1.7
PTPN4-203ENST00000430976 NRAPQ86VF7 1730 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms