RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 FOXB2Q5VYV0 432 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 CD300LDQ6UXZ3 194 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 DLEU7Q6UYE1 221 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 OR5C1Q8NGR4 320 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 GATAD1Q8WUU5 269 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 CACNG8Q8WXS5 425 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 SMIM10Q96HG1 83 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 FANCD2OSQ96PS1 177 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 DMRTA2Q96SC8 542 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 DEPPQ9NTK1 212 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 TMEM14BQ9NUH8 114 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 MRPL27Q9P0M9 148 aaKnown RBP3.74□□□□□ -1.81
LRRK2-204ENST00000430804 CHST2Q9Y4C5 530 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 CABIN1Q9Y6J0 2220 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 ZNF318Q5VUA4 2279 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 TCHHQ07283 1943 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 IGLL5B9A064 214 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 LY6G6DO95868 133 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 ATP5G1P05496 136 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 C8orf88P0DMB2 117 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 SCGB1A1P11684 91 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 GALP22466 123 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 ATP5G3P48201 142 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 C17orf82Q86X59 251 aaPredicted RBP3.74□□□□□ -1.81
LRRK2-204ENST00000430804 GLMPQ8WWB7 406 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 NPIPB3Q92617 1050 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 GPX7Q96SL4 187 aaPredicted RBP3.74□□□□□ -1.81
LRRK2-204ENST00000430804 NDUFAF3Q9BU61 184 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 C1orf43Q9BWL3 253 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 TCF19Q9Y242 345 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 RFNGQ9Y644 331 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 IGLV3-32A0A0A0MS00 114 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 RHODO00212 210 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 ICMTO60725 284 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 ETV1P50549 477 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 C15orf32Q32M92 178 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 RUSC1-AS1Q66K80 236 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 HOGA1Q86XE5 327 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 C10orf105Q8TEF2 133 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 TCEAL7Q9BRU2 100 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 C1QTNF5Q9BXJ0 243 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 HSPB8Q9UJY1 196 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 ICOSQ9Y6W8 199 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 CNOT1A5YKK6 2376 aaKnown RBP3.74□□□□□ -1.81
LRRK2-204ENST00000430804 IGKV2D-24A0A075B6R9 120 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 TRBV7-9A0A0J9YWB2 115 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 ZNF701M0R085 212 aaPredicted RBP3.74□□□□□ -1.81
LRRK2-204ENST00000430804 ZNHIT1O43257 154 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 PAX4O43316 350 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 HLA-DRB1P01911 266 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 RPLP1P05386 114 aaKnown RBP3.74□□□□□ -1.81
LRRK2-204ENST00000430804 POLR2IP36954 125 aaKnown RBP3.74□□□□□ -1.81
LRRK2-204ENST00000430804 DEFB112Q30KQ8 113 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 HEPN1Q6WQI6 88 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 MZB1Q8WU39 189 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 TMEM70Q9BUB7 260 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 UNC13CQ8NB66 2214 aa3.74□□□□□ -1.81
LRRK2-204ENST00000430804 M0R381 172 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 GREM1O60565 184 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 YPEL1O60688 119 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 IFI27P40305 119 aaPredicted RBP3.73□□□□□ -1.81
LRRK2-204ENST00000430804 SNRPNP63162 240 aaKnown RBP3.73□□□□□ -1.81
LRRK2-204ENST00000430804 KLRD1Q13241 179 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 FOXE3Q13461 319 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 UQCC3Q6UW78 93 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 ZCCHC24Q8N2G6 241 aaKnown RBP3.73□□□□□ -1.81
LRRK2-204ENST00000430804 KIR2DL5BQ8NHK3 375 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 ZFAND2BQ8WV99 257 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 YPEL2Q96QA6 119 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 TRAV34A0A0B4J273 112 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 MARCH11A6NNE9 402 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 OIP5O43482 229 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 SRSF10O75494 262 aaKnown RBP3.73□□□□□ -1.81
LRRK2-204ENST00000430804 P2RY1P47900 373 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 DYNLT3P51808 116 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 MRPL23Q16540 153 aaKnown RBP3.73□□□□□ -1.81
LRRK2-204ENST00000430804 SOSTQ9BQB4 213 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 NPCDR1Q9BY65 106 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 MEGF9Q9H1U4 602 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 SIGLEC8Q9NYZ4 499 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 ARFGEF1Q9Y6D6 1849 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 TRAV3A0A0B4J244 114 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 CCKARP32238 428 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 ZNF474Q6S9Z5 364 aaPredicted RBP3.73□□□□□ -1.81
LRRK2-204ENST00000430804 TREML4Q6UXN2 200 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 OR2K2Q8NGT1 345 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 NAT8Q9UHE5 227 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 ERVS71-1P61550 626 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 TMEM241Q24JQ0 296 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 LDLRAD3Q86YD5 345 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 SMIM12Q96EX1 92 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 SRSF8Q9BRL6 282 aaKnown RBP3.73□□□□□ -1.81
LRRK2-204ENST00000430804 RHPN1-AS1Q9BWJ2 59 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 SLC25A32Q9H2D1 315 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 IFI27L2Q9H2X8 130 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 SMCHD1A6NHR9 2005 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 IGHV1-3A0A0C4DH29 117 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 GIPP09681 153 aaPredicted RBP3.73□□□□□ -1.81
LRRK2-204ENST00000430804 CYP2G1PQ6ZSU1 146 aa3.73□□□□□ -1.81
LRRK2-204ENST00000430804 ATAD5Q96QE3 1844 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms