RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 GABARAPO95166 117 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 IGKV1-5P01602 117 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 P0C879 139 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 RCVRNP35243 200 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 ZNF124Q15973 351 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 SLC25A24Q6NUK1 477 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 LHFPL1Q86WI0 220 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 UBAC2Q8NBM4 344 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 OR6F1Q8NGZ6 308 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 AIFM2Q9BRQ8 373 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 MIXL1Q9H2W2 232 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 C21orf62Q9NYP8 219 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 KLK11Q9UBX7 282 aa8.75□□□□□ -1.01
HDAC4-202ENST00000430200 DNAH10Q8IVF4 4471 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 IGHV3-49A0A0A0MS15 119 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 A0A0G2JRQ6 117 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 IFNA6P05013 189 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 CTSGP08311 255 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 ELLP55199 621 aaPredicted RBP8.74□□□□□ -1.01
HDAC4-202ENST00000430200 THOC7Q6I9Y2 204 aaKnown RBP8.74□□□□□ -1.01
HDAC4-202ENST00000430200 SLC16A13Q7RTY0 426 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 CADM3Q8N126 398 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 OR1L6Q8NGR2 347 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 OR52I2Q8NH67 350 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 BSCL2Q96G97 398 aaPredicted RBP8.74□□□□□ -1.01
HDAC4-202ENST00000430200 TP53RKQ96S44 253 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 GGTLC1Q9BX51 225 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 SCPEP1Q9HB40 452 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 DAZ1Q9NQZ3 744 aaKnown RBP8.74□□□□□ -1.01
HDAC4-202ENST00000430200 MRPL27Q9P0M9 148 aaKnown RBP8.74□□□□□ -1.01
HDAC4-202ENST00000430200 UFC1Q9Y3C8 167 aa8.74□□□□□ -1.01
HDAC4-202ENST00000430200 CD3DP04234 171 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 PPP5CP53041 499 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 PRCDQ00LT1 54 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 FAAP20Q6NZ36 180 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 CMTM1Q8IZ96 169 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 OR2C3Q8N628 320 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 OR5B3Q8NH48 314 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 BORCS5Q969J3 196 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 MARC2Q969Z3 335 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 ABHD1Q96SE0 405 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 C20orf24Q9BUV8 137 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 C5orf66Q9H5L9 145 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 VCX3AQ9NNX9 186 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 MRPL36Q9P0J6 103 aaKnown RBP8.73□□□□□ -1.01
HDAC4-202ENST00000430200 PRNDQ9UKY0 176 aa8.73□□□□□ -1.01
HDAC4-202ENST00000430200 IGHV3OR16-13A0A075B7E8 117 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 IGHV3-74A0A0B4J1X5 117 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 TRAV25A0A0B4J276 109 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 NDUFA4O00483 81 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 TSPAN4O14817 238 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 UCP3P55916 312 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 TSPAN5P62079 268 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 DEFB135Q30KP9 77 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 Q56UQ5 140 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 HSD17B13Q7Z5P4 300 aaPredicted RBP8.72□□□□□ -1.01
HDAC4-202ENST00000430200 ZNF114Q8NC26 417 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 OR1P1Q8NH06 330 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 MISP3Q96FF7 219 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 RNF2Q99496 336 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 SPAG8Q99932 426 aaPredicted RBP8.72□□□□□ -1.01
HDAC4-202ENST00000430200 THYN1Q9P016 225 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 EXTL2Q9UBQ6 330 aa8.72□□□□□ -1.01
HDAC4-202ENST00000430200 LOC102724200A0A096LPH7 203 aaPredicted RBP8.71□□□□□ -1.02
HDAC4-202ENST00000430200 A0A0B4J293 547 aa8.71□□□□□ -1.02
HDAC4-202ENST00000430200 SNAPC5O75971 98 aa8.71□□□□□ -1.02
HDAC4-202ENST00000430200 MT-CO2P00403 227 aa8.71□□□□□ -1.02
HDAC4-202ENST00000430200 APOHP02749 345 aaPredicted RBP8.71□□□□□ -1.02
HDAC4-202ENST00000430200 CTSDP07339 412 aaPredicted RBP8.71□□□□□ -1.02
HDAC4-202ENST00000430200 RND3P61587 244 aa8.71□□□□□ -1.02
HDAC4-202ENST00000430200 SPCS2Q15005 226 aa8.71□□□□□ -1.02
HDAC4-202ENST00000430200 GPR107Q5VW38 600 aa8.71□□□□□ -1.02
HDAC4-202ENST00000430200 SPSB3Q6PJ21 355 aa8.71□□□□□ -1.02
HDAC4-202ENST00000430200 RBPMS2Q6ZRY4 209 aaKnown RBP8.71□□□□□ -1.02
HDAC4-202ENST00000430200 SLC38A6Q8IZM9 456 aa8.71□□□□□ -1.02
HDAC4-202ENST00000430200 LHFPL5Q8TAF8 219 aa8.71□□□□□ -1.02
HDAC4-202ENST00000430200 CMTM3Q96MX0 182 aa8.71□□□□□ -1.02
HDAC4-202ENST00000430200 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.02
HDAC4-202ENST00000430200 FAM212BQ9NTI7 297 aaPredicted RBP8.71□□□□□ -1.02
HDAC4-202ENST00000430200 A0A0J9YWU9 116 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 FAM25AB3EWG3 89 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 FAM25CB3EWG5 89 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 FAM25GB3EWG6 89 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 CHEK1O14757 476 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 FCGR2BP31994 310 aaPredicted RBP8.7□□□□□ -1.02
HDAC4-202ENST00000430200 PIGPP57054 158 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 SP6Q3SY56 376 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 H2BFWTQ7Z2G1 175 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 APRG1Q8IVJ8 170 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 LILRB2Q8N423 598 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 FAM24BQ8N5W8 94 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 OR13C8Q8NGS7 320 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 PINX1Q96BK5 328 aaKnown RBP8.7□□□□□ -1.02
HDAC4-202ENST00000430200 OR10C1Q96KK4 312 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 ATP6V0BQ99437 205 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 NXF2Q9GZY0 626 aaKnown RBP8.7□□□□□ -1.02
HDAC4-202ENST00000430200 MTFP1Q9UDX5 166 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 SMPXQ9UHP9 88 aa8.7□□□□□ -1.02
HDAC4-202ENST00000430200 DNAH6Q9C0G6 4158 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 IGKV3-7A0A075B6H7 116 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms