RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 CA10Q9NS85 328 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 TMEM38BQ9NVV0 291 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 TMEM242Q9NWH2 141 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 CLN6Q9NWW5 311 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 TAS2R8Q9NYW2 309 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 FLVCR2Q9UPI3 526 aa3.05□□□□□ -1.92
HMGB3-203ENST00000430118 SONP18583 2426 aaKnown RBP3.05□□□□□ -1.92
HMGB3-203ENST00000430118 TLN2Q9Y4G6 2542 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 AKAP6Q13023 2319 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 SEC16AO15027 2179 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 TRBV24-1A0A075B6N3 115 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 IGHV3OR16-13A0A075B7E8 117 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 TRBV6-7A0A0A0MS04 114 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 TRBV9A0A0B4J1U6 114 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 A0A0B4J2A0 478 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 A0A1B0GTI1 187 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 KRTAP16-1A8MUX0 517 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 DEFB108AA8MXU0 73 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 H3BN98 237 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 GABARAPH6UMI1 98 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 M0R036 132 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 GOSR2O14653 212 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 BRI3O95415 125 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 RAB36O95755 333 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 MT-CO2P00403 227 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 CATP04040 527 aaKnown RBP3.04□□□□□ -1.92
HMGB3-203ENST00000430118 OR5G3P0C626 314 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 TRGC1P0CF51 173 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF19P17023 458 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 ELK1P19419 428 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 CXCR1P25024 350 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 FAUP35544 74 aaKnown RBP3.04□□□□□ -1.92
HMGB3-203ENST00000430118 AQP2P41181 271 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 DNASE1L1P49184 302 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 RND2P52198 227 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 POLR2HP52434 150 aaKnown RBP3.04□□□□□ -1.92
HMGB3-203ENST00000430118 AKR1C2P52895 323 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 TBPL1P62380 186 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 HIST1H3AP68431 136 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 PRDX1Q06830 199 aaKnown RBP3.04□□□□□ -1.92
HMGB3-203ENST00000430118 LOXL1Q08397 574 aaPredicted RBP3.04□□□□□ -1.92
HMGB3-203ENST00000430118 CEACAM21Q3KPI0 293 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 TTLL9Q3SXZ7 439 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 TMEM176BQ3YBM2 270 aaPredicted RBP3.04□□□□□ -1.92
HMGB3-203ENST00000430118 C5orf47Q569G3 176 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 SPIN3Q5JUX0 258 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 GPR157Q5UAW9 335 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 SMARCD3Q6STE5 483 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF705AQ6ZN79 300 aaPredicted RBP3.04□□□□□ -1.92
HMGB3-203ENST00000430118 MOB1BQ7L9L4 216 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 S100A7AQ86SG5 101 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF546Q86UE3 836 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 PNKDQ8N490 385 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 TEX29Q8N6K0 151 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 ARIH2OSQ8N7S6 290 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 OR8G5Q8NG78 346 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 OR10H4Q8NGA5 316 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 OR10G3Q8NGC4 313 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 OR52L1Q8NGH7 329 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 OR5B3Q8NH48 314 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 SFXN5Q8TD22 340 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 GPX8Q8TED1 209 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF418Q8TF45 676 aaPredicted RBP3.04□□□□□ -1.92
HMGB3-203ENST00000430118 CHCHD10Q8WYQ3 142 aaPredicted RBP3.04□□□□□ -1.92
HMGB3-203ENST00000430118 TSLPQ969D9 159 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 ISOC2Q96AB3 205 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 MRAP2Q96G30 205 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 OR2A5Q96R48 311 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 NRTNQ99748 197 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 DOHHQ9BU89 302 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF471Q9BX82 626 aaPredicted RBP3.04□□□□□ -1.92
HMGB3-203ENST00000430118 Q9H3A6 140 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 C1orf198Q9H425 327 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 ABRACLQ9P1F3 81 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 NAT8Q9UHE5 227 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 TAC3Q9UHF0 121 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 SHPKQ9UHJ6 478 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 OR51B2Q9Y5P1 312 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 ENPP4Q9Y6X5 453 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 V9GY05 133 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 SPTBP11277 2137 aa3.04□□□□□ -1.92
HMGB3-203ENST00000430118 CCDC88CQ9P219 2028 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 IGKV3D-15A0A087WSY6 115 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 IGHV1-69-2A0A0G2JMI3 117 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 KBTBD11-OT1A0A1B0GTJ5 212 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 A0A1B0GW15 77 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 IFITM5A6NNB3 132 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 K7EPK0 472 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 SLC17A3O00476 420 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 TAAR5O14804 337 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 OR7C2O60412 319 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF354AO60765 605 aaPredicted RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 TRAPPC6AO75865 159 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 RCBTB2O95199 551 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 GPR75O95800 540 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 TBX6O95947 436 aaPredicted RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 OR8U9P0C7N5 309 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 CSNK1A1P48729 337 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 SULT1A2P50226 295 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 GPM6AP51674 278 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms