RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 YPEL1O60688 119 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 OR10J1P30954 320 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 MUC21Q5SSG8 566 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 TMEM78Q5T7P6 136 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 DDB2Q92466 427 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 YPEL2Q96QA6 119 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 VAX2Q9UIW0 290 aa10.73□□□□□ -0.69
PTCH1-207ENST00000429896 H3BQ15 152 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 LRRC75BQ2VPJ9 315 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 STPG2Q8N412 459 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 HSPB8Q9UJY1 196 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 NPIPB11E5RHQ5 1161 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 M0R1W7 72 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 S1PR2O95136 353 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 RPLP1P05386 114 aaKnown RBP10.72□□□□□ -0.69
PTCH1-207ENST00000429896 ATP5G2Q06055 141 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 NHLRC3Q5JS37 347 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 SELLP14151 372 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 FGFRL1Q8N441 504 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 TNFSF18Q9UNG2 199 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 MARCH11A6NNE9 402 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 ZNF324BQ6AW86 544 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-207ENST00000429896 LINC00469Q8N7U9 141 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 OSR1Q8TAX0 266 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-207ENST00000429896 ANAPC16Q96DE5 110 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 PXMP4Q9Y6I8 212 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 M0QZK8 103 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 WISP2O76076 250 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 BPIFA4PQ86YQ2 179 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 TNFRSF14Q92956 283 aa10.72□□□□□ -0.69
PTCH1-207ENST00000429896 HYPMO75409 117 aa10.71□□□□□ -0.69
PTCH1-207ENST00000429896 RPUSD1Q9UJJ7 312 aaKnown RBP10.71□□□□□ -0.69
PTCH1-207ENST00000429896 PPP1R17O96001 155 aa10.71□□□□□ -0.69
PTCH1-207ENST00000429896 GATA4P43694 442 aa10.71□□□□□ -0.69
PTCH1-207ENST00000429896 SELENOHQ8IZQ5 122 aaKnown RBP10.71□□□□□ -0.69
PTCH1-207ENST00000429896 FAM89BQ8N5H3 189 aa10.71□□□□□ -0.69
PTCH1-207ENST00000429896 A0A087X0M5 115 aa10.71□□□□□ -0.69
PTCH1-207ENST00000429896 A0A1B0GX30 115 aa10.71□□□□□ -0.69
PTCH1-207ENST00000429896 LDLRAD4O15165 306 aa10.71□□□□□ -0.69
PTCH1-207ENST00000429896 DAZAP2Q15038 168 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-207ENST00000429896 LYPD2Q6UXB3 125 aa10.71□□□□□ -0.69
PTCH1-207ENST00000429896 LSM10Q969L4 123 aaKnown RBP10.71□□□□□ -0.69
PTCH1-207ENST00000429896 GPR61Q9BZJ8 451 aa10.71□□□□□ -0.69
PTCH1-207ENST00000429896 OTOGLQ3ZCN5 2332 aa10.71□□□□□ -0.7
PTCH1-207ENST00000429896 COL4A2P08572 1712 aa10.71□□□□□ -0.7
PTCH1-207ENST00000429896 CA2P00918 260 aa10.71□□□□□ -0.7
PTCH1-207ENST00000429896 MSMBP08118 114 aa10.71□□□□□ -0.7
PTCH1-207ENST00000429896 FAM3BP58499 235 aaPredicted RBP10.71□□□□□ -0.7
PTCH1-207ENST00000429896 ZNF343Q6P1L6 599 aa10.71□□□□□ -0.7
PTCH1-207ENST00000429896 OR52M1Q8NGK5 317 aa10.71□□□□□ -0.7
PTCH1-207ENST00000429896 SLC25A33Q9BSK2 321 aa10.71□□□□□ -0.7
PTCH1-207ENST00000429896 QTRT1Q9BXR0 403 aaKnown RBP10.71□□□□□ -0.7
PTCH1-207ENST00000429896 COL5A1P20908 1838 aaPredicted RBP10.71□□□□□ -0.7
PTCH1-207ENST00000429896 GATA3P23771 443 aa10.71□□□□□ -0.7
PTCH1-207ENST00000429896 RBKSQ9H477 322 aa10.71□□□□□ -0.7
PTCH1-207ENST00000429896 TUBA4BQ9H853 241 aa10.71□□□□□ -0.7
PTCH1-207ENST00000429896 C9JCJ5 164 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 MORN2Q502X0 79 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 HS3ST6Q96QI5 342 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 LYRM2Q9NU23 88 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-207ENST00000429896 MOB4Q9Y3A3 225 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 IGLV3-9A0A075B6K5 115 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 SAA2-SAA4A0A096LPE2 208 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 A0A0B4J293 547 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 SAA2P0DJI9 122 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-207ENST00000429896 IGHV1-8P0DP01 117 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 MPZP25189 248 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 ZNF273Q14593 569 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 ZNF56Q15929 161 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 OR4X2Q8NGF9 303 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 PRSS22Q9GZN4 317 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 NPDC1Q9NQX5 325 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-207ENST00000429896 ISLRO14498 428 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 NDUFB4O95168 129 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 CD55P08174 381 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 OR13C6PQ8NH95 151 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 IGKV1D-17A0A075B6S4 117 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 IGHV2-26A0A0B4J1V2 119 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 MFAP2P55001 183 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 DLX6P56179 175 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 TRBV6-7A0A0A0MS04 114 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 KBTBD11O94819 623 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 VDAC2P45880 294 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-207ENST00000429896 LYRM7Q5U5X0 104 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 Q6ZR03 302 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 OR11H4Q8NGC9 324 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 FBXL15Q9H469 300 aa10.7□□□□□ -0.7
PTCH1-207ENST00000429896 GCGP01275 180 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 ATP6V0CP27449 155 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 HSPE1P61604 102 aaKnown RBP10.69□□□□□ -0.7
PTCH1-207ENST00000429896 DEFB113Q30KQ7 82 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 OR5AC2Q9NZP5 309 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 PHLDA3Q9Y5J5 127 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 PCDH15Q96QU1 1955 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 APC2O95996 2303 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 PGPA6NDG6 321 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 LINC00869P0C866 280 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 SRD5A1P18405 259 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 CKS2P33552 79 aa10.69□□□□□ -0.7
PTCH1-207ENST00000429896 CX3CL1P78423 397 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms