RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 UBALD2Q8IYN6 164 aa11.41□□□□□ -0.58
SGMS1-203ENST00000429490 RNASEH2CQ8TDP1 164 aaKnown RBP11.41□□□□□ -0.58
SGMS1-203ENST00000429490 VPS25Q9BRG1 176 aa11.41□□□□□ -0.58
SGMS1-203ENST00000429490 MIEN1Q9BRT3 115 aa11.41□□□□□ -0.58
SGMS1-203ENST00000429490 TRBV6-6A0A0A6YYG2 114 aa11.41□□□□□ -0.58
SGMS1-203ENST00000429490 DAZAP2Q15038 168 aaPredicted RBP11.41□□□□□ -0.58
SGMS1-203ENST00000429490 TMEM208Q9BTX3 173 aa11.41□□□□□ -0.58
SGMS1-203ENST00000429490 DPRXA6NFQ7 191 aa11.41□□□□□ -0.58
SGMS1-203ENST00000429490 NPSP0C0P6 89 aa11.41□□□□□ -0.58
SGMS1-203ENST00000429490 FRMD6-AS1P0C7T7 363 aa11.41□□□□□ -0.58
SGMS1-203ENST00000429490 STAG3L2P0CL84 134 aa11.41□□□□□ -0.58
SGMS1-203ENST00000429490 STAG3L3P0CL85 134 aa11.41□□□□□ -0.58
SGMS1-203ENST00000429490 TNFAIP6P98066 277 aaPredicted RBP11.41□□□□□ -0.58
SGMS1-203ENST00000429490 SPRR3Q9UBC9 169 aa11.41□□□□□ -0.58
SGMS1-203ENST00000429490 A0A1W2PRD5 423 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 A0A1W2PRF3 423 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 A0A1W2PRM7 423 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 IGLV2-14P01704 120 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 HCP5Q6MZN7 132 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 WFDC8Q8IUA0 241 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 OR9G1Q8NH87 305 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 CCL17Q92583 94 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 MBNL3Q9NUK0 354 aaKnown RBP11.4□□□□□ -0.58
SGMS1-203ENST00000429490 BET1LQ9NYM9 111 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 Q6ZWC4 215 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 Q8NFD4 153 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 OR4B1Q8NGF8 309 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 LINC00479Q96M42 142 aa11.4□□□□□ -0.58
SGMS1-203ENST00000429490 TDGF1P3P51864 188 aa11.4□□□□□ -0.59
SGMS1-203ENST00000429490 FOXL1Q12952 345 aa11.4□□□□□ -0.59
SGMS1-203ENST00000429490 MORN2Q502X0 79 aa11.4□□□□□ -0.59
SGMS1-203ENST00000429490 SELENOKQ9Y6D0 94 aa11.4□□□□□ -0.59
SGMS1-203ENST00000429490 ZGRF1Q86YA3 2104 aa11.39□□□□□ -0.59
SGMS1-203ENST00000429490 RNFT1Q5M7Z0 435 aa11.39□□□□□ -0.59
SGMS1-203ENST00000429490 FLYWCH2Q96CP2 140 aaKnown RBP11.39□□□□□ -0.59
SGMS1-203ENST00000429490 ZNRD1Q9P1U0 126 aa11.39□□□□□ -0.59
SGMS1-203ENST00000429490 TRAV5A0A0B4J249 113 aa11.39□□□□□ -0.59
SGMS1-203ENST00000429490 PRB3Q04118 309 aaPredicted RBP11.39□□□□□ -0.59
SGMS1-203ENST00000429490 OR2T6Q8NHC8 308 aa11.39□□□□□ -0.59
SGMS1-203ENST00000429490 TXNDC17Q9BRA2 123 aa11.39□□□□□ -0.59
SGMS1-203ENST00000429490 UQCR10Q9UDW1 63 aa11.39□□□□□ -0.59
SGMS1-203ENST00000429490 IQCF6A8MYZ5 107 aa11.39□□□□□ -0.59
SGMS1-203ENST00000429490 DIRC2Q96SL1 478 aa11.39□□□□□ -0.59
SGMS1-203ENST00000429490 AMMECR1Q9Y4X0 333 aaPredicted RBP11.39□□□□□ -0.59
SGMS1-203ENST00000429490 TRBV20OR9-2A0A075B6H5 130 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 C21orf140B9A014 251 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 PYYP10082 97 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 ZCCHC24Q8N2G6 241 aaKnown RBP11.38□□□□□ -0.59
SGMS1-203ENST00000429490 CD177Q8N6Q3 437 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 OR10W1Q8NGF6 305 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 RNF2Q99496 336 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 PAXXQ9BUH6 204 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 DYNLRB1Q9NP97 96 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 WASHC3Q9Y3C0 194 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 NOTCH3Q9UM47 2321 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 MALRD1Q5VYJ5 2156 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 DLEU1O43261 78 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 GFRA3O60609 400 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 BPIFB3P59826 476 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 FAM216BQ8N7L0 139 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 NPIPB3Q92617 1050 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 CDX2Q99626 313 aaPredicted RBP11.38□□□□□ -0.59
SGMS1-203ENST00000429490 PRNDQ9UKY0 176 aa11.38□□□□□ -0.59
SGMS1-203ENST00000429490 SERTM2A0A1B0GWG4 89 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 SUB1P53999 127 aaKnown RBP eCLIP11.37□□□□□ -0.59
SGMS1-203ENST00000429490 Q6ZR03 302 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 ZNF596Q8TC21 504 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 TNFSF13O75888 250 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 CD99P14209 185 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 PEAR1Q5VY43 1037 aaPredicted RBP11.37□□□□□ -0.59
SGMS1-203ENST00000429490 C10orf113Q5VZT2 155 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 Q6ZT83 130 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 BHLHA15Q7RTS1 189 aaPredicted RBP11.37□□□□□ -0.59
SGMS1-203ENST00000429490 OR8B2Q96RD0 313 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 PYGO2Q9BRQ0 406 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 JPT1Q9UK76 154 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 MRPS18CQ9Y3D5 142 aaKnown RBP11.37□□□□□ -0.59
SGMS1-203ENST00000429490 SAA2-SAA4A0A096LPE2 208 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 LNP1A1A4G5 178 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 HLA-DQA1P01909 254 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 MT-ND6P03923 174 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 SAA2P0DJI9 122 aaPredicted RBP11.37□□□□□ -0.59
SGMS1-203ENST00000429490 C8orf88P0DMB2 117 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 PDPNQ86YL7 162 aa11.37□□□□□ -0.59
SGMS1-203ENST00000429490 NPIPB11E5RHQ5 1161 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 MOSP00540 346 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 RPL8P62917 257 aaKnown RBP11.36□□□□□ -0.59
SGMS1-203ENST00000429490 PMCHL1Q16048 86 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 SSX8Q7RTT4 187 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 PMCHL2Q9BQD1 86 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 PGPA6NDG6 321 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 NKX6-3A6NJ46 265 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 LOC400499M0QZD8 3231 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 ACSF3Q4G176 576 aaPredicted RBP11.36□□□□□ -0.59
SGMS1-203ENST00000429490 SNAI2O43623 268 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 CNIH1O95406 144 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 KIR2DS2P43631 304 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 GNG5P63218 68 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 Q6ZVH6 145 aa11.36□□□□□ -0.59
SGMS1-203ENST00000429490 FBXL7Q9UJT9 491 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms