RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 SLC35E4Q6ICL7 350 aa9.37□□□□□ -0.91
PABPC1P11-201ENST00000428966 LILRB2Q8N423 598 aa9.37□□□□□ -0.91
PABPC1P11-201ENST00000428966 ZBTB34Q8NCN2 500 aa9.37□□□□□ -0.91
PABPC1P11-201ENST00000428966 TMEM158Q8WZ71 300 aa9.37□□□□□ -0.91
PABPC1P11-201ENST00000428966 TMEM133Q9H2Q1 129 aa9.37□□□□□ -0.91
PABPC1P11-201ENST00000428966 MMP24Q9Y5R2 645 aa9.37□□□□□ -0.91
PABPC1P11-201ENST00000428966 KIAA2026Q5HYC2 2103 aa9.37□□□□□ -0.91
PABPC1P11-201ENST00000428966 IGHV2-26A0A0B4J1V2 119 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 ODF3BA8MYP8 253 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 LINC00587B1AMM8 73 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 H3BP45 60 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 IGHV4-59P01825 116 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 RAB11AP62491 216 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 TMEM41BQ5BJD5 291 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 LHFPL4Q7Z7J7 247 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 OR11H6Q8NGC7 330 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 RFESDQ8TAC1 157 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 C19orf24Q9BVV8 132 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 CTDSP1Q9GZU7 261 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 RPRMQ9NS64 109 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 OR1A1Q9P1Q5 309 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 ZNRD1Q9P1U0 126 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 VAX2Q9UIW0 290 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 TIMM9Q9Y5J7 89 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 ELOA3CA0A087WX78 387 aaPredicted RBP9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 TMEM30CPA0ZSE6 113 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 ZNF729A6NN14 1252 aaPredicted RBP9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 SEC14L6B5MCN3 397 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 CLDN34H7C241 214 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 IGKV1-39P01597 117 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 IGKV1D-39P04432 117 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 FBP1P09467 338 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 NDUFA6P56556 154 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 Q6ZRM9 215 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 LINC00574Q9H8X3 128 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 TNFRSF19Q9NS68 423 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 GAR1Q9NY12 217 aaKnown RBP9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 CALYQ9NYX4 217 aa9.36□□□□□ -0.91
PABPC1P11-201ENST00000428966 TENM1Q9UKZ4 2725 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 ZFP92A6NM28 416 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 CYB5BO43169 146 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 NDUFS6O75380 124 aaKnown RBP9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 IGKV1-5P01602 117 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 IGLV2-14P01704 120 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 CXCL1P09341 107 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 METTL15P1P0C7V9 234 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 IAPPP10997 89 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 IER3P46695 156 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 RND2P52198 227 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 MSMO1Q15800 293 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 ATP6V1FQ16864 119 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 FAM90A2PQ658T7 463 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 DYNAPQ8N1N2 210 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 UBALD1Q8TB05 177 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 FAM216AQ8WUB2 273 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 SSMEM1Q8WWF3 244 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 TAF15Q92804 592 aaKnown RBP eCLIP9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 RSG1Q9BU20 258 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 GGACTQ9BVM4 153 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 WDR61Q9GZS3 305 aaKnown RBP9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 MBNL3Q9NUK0 354 aaKnown RBP9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 KCNIP1Q9NZI2 227 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 DOK5Q9P104 306 aa9.35□□□□□ -0.91
PABPC1P11-201ENST00000428966 C15orf65H3BRN8 121 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 OPN1MWP04001 364 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 RNASE1P07998 156 aaKnown RBP9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 OPN1MW2P0DN77 364 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 OPN1MW3P0DN78 364 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 CEACAM6P40199 344 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 ZNF585BQ52M93 769 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 LCN15Q6UWW0 184 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 ABHD12Q8N2K0 398 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 OR4P4Q8NGL7 312 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 CLEC7AQ9BXN2 247 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 DMRT1Q9Y5R6 373 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 A0A087X0M5 115 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 TGIF2-C20orf24A0A0A6YYL0 155 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 A0A1B0GX30 115 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 IGLV1-47P01700 117 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 IGHV3-7P01780 117 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 MBP02144 154 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 GZMHP20718 246 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 LGALS4P56470 323 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 LTC4SQ16873 150 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 ZNF343Q6P1L6 599 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 PRR18Q8N4B5 295 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 ZNF645Q8N7E2 425 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 BEND2Q8NDZ0 799 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 LEAP2Q969E1 77 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 RCC1LQ96I51 464 aaKnown RBP9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 FAM210BQ96KR6 192 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 SDF2L1Q9HCN8 221 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 URGCP-MRPS24S4R325 110 aa9.34□□□□□ -0.91
PABPC1P11-201ENST00000428966 MAP1LC3B2A6NCE7 125 aa9.33□□□□□ -0.92
PABPC1P11-201ENST00000428966 C12orf77C9JDV5 145 aa9.33□□□□□ -0.92
PABPC1P11-201ENST00000428966 PPP1R2P9O14990 202 aa9.33□□□□□ -0.92
PABPC1P11-201ENST00000428966 YIF1AO95070 293 aa9.33□□□□□ -0.92
PABPC1P11-201ENST00000428966 CD81P60033 236 aa9.33□□□□□ -0.92
PABPC1P11-201ENST00000428966 SLC38A11Q08AI6 406 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms