RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 PRR20AP86496 221 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 FBXL19-AS1Q494R0 122 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 TMEM167AQ8TBQ9 72 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 ABHD5Q8WTS1 349 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 BBC3Q96PG8 261 aaPredicted RBP11.14□□□□□ -0.63
THBS3-202ENST00000428962 ITPR1Q14643 2758 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 YLPM1P49750 1951 aaKnown RBP11.13□□□□□ -0.63
THBS3-202ENST00000428962 PPP1R2P9O14990 202 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 PFN1P07737 140 aaKnown RBP11.13□□□□□ -0.63
THBS3-202ENST00000428962 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
THBS3-202ENST00000428962 CHRNB4P30926 498 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 MC5RP33032 325 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 SRP14P37108 136 aaKnown RBP11.13□□□□□ -0.63
THBS3-202ENST00000428962 CA7P43166 264 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 CDX1P47902 265 aaPredicted RBP11.13□□□□□ -0.63
THBS3-202ENST00000428962 DLX6P56179 175 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 NDUFA6P56556 154 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 GNB1P62873 340 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 NABP2Q9BQ15 211 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 PYGO2Q9BRQ0 406 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 C19orf24Q9BVV8 132 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 SRD5A3Q9H8P0 318 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 NDUFA4L2Q9NRX3 87 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 ARL2-SNX15V9GYD0 113 aa11.13□□□□□ -0.63
THBS3-202ENST00000428962 RP1L1Q8IWN7 2480 aaPredicted RBP11.13□□□□□ -0.63
THBS3-202ENST00000428962 ELOA3CA0A087WX78 387 aaPredicted RBP11.12□□□□□ -0.63
THBS3-202ENST00000428962 HIST1H2BKO60814 126 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 HIST1H2BJP06899 126 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 HIST1H2BOP23527 126 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 NPPCP23582 126 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 HIST1H2BBP33778 126 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 HIST1H2BDP58876 126 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 HIST1H2BCP62807 126 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 HIST2H2BEQ16778 126 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 VMA21Q3ZAQ7 101 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.12□□□□□ -0.63
THBS3-202ENST00000428962 KCNIP4Q6PIL6 250 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 TGIF2LXQ8IUE1 241 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 CACNG8Q8WXS5 425 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 TNFRSF14Q92956 283 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 HIST1H2BHQ93079 126 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 ST6GALNAC6Q969X2 333 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 BTF3L4Q96K17 158 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 HIST1H2BNQ99877 126 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 HIST1H2BMQ99879 126 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 CHODLQ9H9P2 273 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 SLC45A2Q9UMX9 530 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 ICE1Q9Y2F5 2266 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 NDUFB4O95168 129 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 FSTL3O95633 263 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 IGHV1-8P0DP01 117 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 GPX4P36969 197 aaPredicted RBP11.12□□□□□ -0.63
THBS3-202ENST00000428962 REG1BP48304 166 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 OR51G1Q8NGK1 321 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 UHRF2Q96PU4 802 aa11.12□□□□□ -0.63
THBS3-202ENST00000428962 SEPSECSQ9HD40 501 aaKnown RBP11.12□□□□□ -0.63
THBS3-202ENST00000428962 FAM90A27PA6NNH2 459 aa11.11□□□□□ -0.63
THBS3-202ENST00000428962 PPP5D1E7EU14 171 aa11.11□□□□□ -0.63
THBS3-202ENST00000428962 S100A2P29034 98 aa11.11□□□□□ -0.63
THBS3-202ENST00000428962 SUB1P53999 127 aaKnown RBP eCLIP11.11□□□□□ -0.63
THBS3-202ENST00000428962 CD69Q07108 199 aa11.11□□□□□ -0.63
THBS3-202ENST00000428962 HLA-DRB5Q30154 266 aa11.11□□□□□ -0.63
THBS3-202ENST00000428962 LINC01551Q86U37 167 aa11.11□□□□□ -0.63
THBS3-202ENST00000428962 MRPL41Q8IXM3 137 aaKnown RBP11.11□□□□□ -0.63
THBS3-202ENST00000428962 PNKDQ8N490 385 aa11.11□□□□□ -0.63
THBS3-202ENST00000428962 NECAP1Q8NC96 275 aa11.11□□□□□ -0.63
THBS3-202ENST00000428962 TMEM133Q9H2Q1 129 aa11.11□□□□□ -0.63
THBS3-202ENST00000428962 TMEM167BQ9NRX6 74 aa11.11□□□□□ -0.63
THBS3-202ENST00000428962 TECRQ9NZ01 308 aaKnown RBP11.11□□□□□ -0.63
THBS3-202ENST00000428962 FUT9Q9Y231 359 aa11.11□□□□□ -0.63
THBS3-202ENST00000428962 LINC00869P0C866 280 aa11.1□□□□□ -0.63
THBS3-202ENST00000428962 TRGC1P0CF51 173 aa11.1□□□□□ -0.63
THBS3-202ENST00000428962 FAM3BP58499 235 aaPredicted RBP11.1□□□□□ -0.63
THBS3-202ENST00000428962 TAS2R45P59539 299 aa11.1□□□□□ -0.63
THBS3-202ENST00000428962 KLRB1Q12918 225 aa11.1□□□□□ -0.63
THBS3-202ENST00000428962 GAMTQ14353 236 aa11.1□□□□□ -0.63
THBS3-202ENST00000428962 FAM78BQ5VT40 261 aa11.1□□□□□ -0.63
THBS3-202ENST00000428962 SLC16A13Q7RTY0 426 aa11.1□□□□□ -0.63
THBS3-202ENST00000428962 ST6GALNAC3Q8NDV1 305 aa11.1□□□□□ -0.63
THBS3-202ENST00000428962 OR4P4Q8NGL7 312 aa11.1□□□□□ -0.63
THBS3-202ENST00000428962 RNASEH2CQ8TDP1 164 aaKnown RBP11.1□□□□□ -0.63
THBS3-202ENST00000428962 LGALS7P47929 136 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 MUC15Q8N387 334 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 OR2T10Q8NGZ9 312 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 FRZBQ92765 325 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 IMMP2LQ96T52 175 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 RNF2Q99496 336 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 YTHDF2Q9Y5A9 579 aaKnown RBP11.09□□□□□ -0.63
THBS3-202ENST00000428962 NBEAQ8NFP9 2946 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 BOD1L1Q8NFC6 3051 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 MDFIC2A0A1B0GVS7 189 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 SCO2A0A1W2PP80 73 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 CCL21O00585 134 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 GGCTO75223 188 aaKnown RBP11.09□□□□□ -0.63
THBS3-202ENST00000428962 AREGP15514 252 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 OR10J1P30954 320 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 PRRX1P54821 245 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 SPATA31B1PQ5VZV4 182 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 PQLC2Q6ZP29 291 aa11.09□□□□□ -0.63
THBS3-202ENST00000428962 OR10W1Q8NGF6 305 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms