RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 THBS3P49746 956 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 PMS2P11Q13670 270 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 PEA15Q15121 130 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 IZUMO4Q1ZYL8 232 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 CT45A1Q5HYN5 189 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 Q6YL49 198 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 TCF23Q7RTU1 214 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 ZNF429Q86V71 674 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 WFDC3Q8IUB2 231 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 PNKDQ8N490 385 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 C11orf42Q8N5U0 333 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 HSD17B11Q8NBQ5 300 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 CT45A3Q8NHU0 189 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 ZNF251Q9BRH9 671 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 RBKSQ9H477 322 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 TIMM9Q9Y5J7 89 aa6.93□□□□□ -1.3
HDAC1-202ENST00000428704 LCE6AA0A183 80 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 MARCH11A6NNE9 402 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 M0R1W7 72 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 SOX15O60248 233 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 SCO1O75880 301 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 IGHV4-59P01825 116 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 PRH1P02810 166 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 IL6RP08887 468 aaPredicted RBP6.92□□□□□ -1.3
HDAC1-202ENST00000428704 NQO2P16083 231 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 ADCYAP1P18509 176 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 SAA4P35542 130 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 DLX6P56179 175 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 SRSF3P84103 164 aaKnown RBP6.92□□□□□ -1.3
HDAC1-202ENST00000428704 ARL16Q0P5N6 197 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 ZNF816Q0VGE8 651 aaPredicted RBP6.92□□□□□ -1.3
HDAC1-202ENST00000428704 ZNF273Q14593 569 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 CLINT1Q14677 625 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 VWC2Q2TAL6 325 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 XP32Q5T750 250 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 TMEM200BQ69YZ2 307 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 C1orf122Q6ZSJ8 110 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 SLC25A48Q6ZT89 311 aaKnown RBP6.92□□□□□ -1.3
HDAC1-202ENST00000428704 HAPLN4Q86UW8 402 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 ZNF596Q8TC21 504 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 SCGB1C1Q8TD33 95 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 SSMEM1Q8WWF3 244 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 MBD3L1Q8WWY6 194 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 PINX1Q96BK5 328 aaKnown RBP6.92□□□□□ -1.3
HDAC1-202ENST00000428704 R3HDM4Q96D70 268 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 AJUBAQ96IF1 538 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 S1PR3Q99500 378 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 B9D2Q9BPU9 175 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 ABHD14AQ9BUJ0 271 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 PBDC1Q9BVG4 233 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 SH3BGRL3Q9H299 93 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 GAL3ST2Q9H3Q3 398 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 TREM1Q9NP99 234 aa6.92□□□□□ -1.3
HDAC1-202ENST00000428704 A0A087X0M5 115 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 A0A1B0GX30 115 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 A0A1W2PRD5 423 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 A0A1W2PRF3 423 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 A0A1W2PRM7 423 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 F8W036 122 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 M0R1X1 148 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 DNASE2O00115 360 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-202ENST00000428704 NPFFO15130 113 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 NDUFS6O75380 124 aaKnown RBP6.91□□□□□ -1.3
HDAC1-202ENST00000428704 SNAPINO95295 136 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 HBE1P02100 147 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 METTL15P1P0C7V9 234 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 CCL3L1P16619 93 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 IER3P46695 156 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 SPCS3P61009 180 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 RPL31P62899 125 aaKnown RBP6.91□□□□□ -1.3
HDAC1-202ENST00000428704 RPP30P78346 268 aaKnown RBP6.91□□□□□ -1.3
HDAC1-202ENST00000428704 BTN1A1Q13410 526 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 GUK1Q16774 197 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 CASC10Q5T4H9 136 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 DHRS7BQ6IAN0 325 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-202ENST00000428704 FAM71F2Q6NXP2 309 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 SPSB3Q6PJ21 355 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 HEPN1Q6WQI6 88 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 TMEM182Q6ZP80 229 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-202ENST00000428704 Q6ZSV7 163 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 LINC00311Q8N616 119 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 TMEM217Q8N7C4 229 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 OR4S2Q8NH73 311 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 DTD1Q8TEA8 209 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 AIFM2Q9BRQ8 373 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 NKX6-2Q9C056 277 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-202ENST00000428704 WDR61Q9GZS3 305 aaKnown RBP6.91□□□□□ -1.3
HDAC1-202ENST00000428704 C16orf95Q9H693 158 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 ZNRD1Q9P1U0 126 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 KIAA1456Q9P272 454 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 U3KQK5 164 aa6.91□□□□□ -1.3
HDAC1-202ENST00000428704 MEX3AA1L020 520 aaKnown RBP6.9□□□□□ -1.3
HDAC1-202ENST00000428704 SLC31A2O15432 143 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 PLXNB1O43157 2135 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 FCGR3BO75015 233 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 NXPH3O95157 252 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 IAPPP10997 89 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 UBE2E1P51965 193 aa6.9□□□□□ -1.3
HDAC1-202ENST00000428704 ATP5IP56385 69 aaPredicted RBP6.9□□□□□ -1.3
HDAC1-202ENST00000428704 ERVFRD-1P60508 538 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms