RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 FAM212BQ9NTI7 297 aaPredicted RBP12.19□□□□□ -0.46
VARS-216ENST00000428445 KIR2DL5BA0A0G2JN68 375 aa12.18□□□□□ -0.46
VARS-216ENST00000428445 KIR2DL5BA0A0G2JPC4 375 aa12.18□□□□□ -0.46
VARS-216ENST00000428445 MARCH11A6NNE9 402 aa12.18□□□□□ -0.46
VARS-216ENST00000428445 PGLYRP1O75594 196 aaPredicted RBP12.18□□□□□ -0.46
VARS-216ENST00000428445 NANOS2P60321 138 aaKnown RBP12.18□□□□□ -0.46
VARS-216ENST00000428445 CMTM1Q8IZ96 169 aa12.18□□□□□ -0.46
VARS-216ENST00000428445 KIR2DL5AQ8N109 375 aa12.18□□□□□ -0.46
VARS-216ENST00000428445 KIR2DL5BQ8NHK3 375 aa12.18□□□□□ -0.46
VARS-216ENST00000428445 C21orf62Q9NYP8 219 aa12.18□□□□□ -0.46
VARS-216ENST00000428445 IGHV3OR16-13A0A075B7E8 117 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 IGHV3-74A0A0B4J1X5 117 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 LOC100506127A0A0U1RQW1 187 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 DBX1A6NMT0 343 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 K7EIM0 57 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 DEFB4AO15263 64 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 SNAPC5O75971 98 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 KRASP01116 189 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 IGHV3-48P01763 117 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 NAT1P18440 290 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 G6PCP35575 357 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 LPAR6P43657 344 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 CMC4P56277 68 aaPredicted RBP12.17□□□□□ -0.46
VARS-216ENST00000428445 Q56UQ5 140 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 LPCAT3Q6P1A2 487 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 GBGT1Q8N5D6 347 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 FCAMRQ8WWV6 532 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 LSM10Q969L4 123 aaKnown RBP12.17□□□□□ -0.46
VARS-216ENST00000428445 MOB3AQ96BX8 217 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 DGCR14Q96DF8 476 aaKnown RBP12.17□□□□□ -0.46
VARS-216ENST00000428445 GALNT14Q96FL9 552 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 TMEM56Q96MV1 263 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 TSC22D3Q99576 134 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 IFT46Q9NQC8 304 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 SMPXQ9UHP9 88 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 F11RQ9Y624 299 aaKnown RBP12.17□□□□□ -0.46
VARS-216ENST00000428445 DNAH6Q9C0G6 4158 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 HECTD4Q9Y4D8 3996 aa12.17□□□□□ -0.46
VARS-216ENST00000428445 OR4C46A6NHA9 309 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 ATP6V1G2O95670 118 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 RLN1P04808 185 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 CTSGP08311 255 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 RFX2P48378 723 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 TAS2R46P59540 309 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 PRR20EP86478 221 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 PRR20CP86479 221 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 PRR20DP86480 221 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 PRR20BP86481 221 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 PRR20AP86496 221 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 OR6F1Q8NGZ6 308 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 EHFQ9NZC4 300 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 FBXL17Q9UF56 701 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 PRNDQ9UKY0 176 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 ANAPC10Q9UM13 185 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 OR51B2Q9Y5P1 312 aa12.16□□□□□ -0.46
VARS-216ENST00000428445 C15orf62A8K5M9 175 aa12.15□□□□□ -0.46
VARS-216ENST00000428445 CHEK1O14757 476 aa12.15□□□□□ -0.46
VARS-216ENST00000428445 PMP2P02689 132 aa12.15□□□□□ -0.46
VARS-216ENST00000428445 S100GP29377 79 aa12.15□□□□□ -0.46
VARS-216ENST00000428445 TSPAN14Q8NG11 270 aa12.15□□□□□ -0.46
VARS-216ENST00000428445 RARRES2Q99969 163 aa12.15□□□□□ -0.46
VARS-216ENST00000428445 ZNF2Q9BSG1 426 aaPredicted RBP12.15□□□□□ -0.46
VARS-216ENST00000428445 RHPN1-AS1Q9BWJ2 59 aa12.15□□□□□ -0.46
VARS-216ENST00000428445 CSTL1Q9H114 145 aa12.15□□□□□ -0.46
VARS-216ENST00000428445 GPR31O00270 319 aa12.14□□□□□ -0.47
VARS-216ENST00000428445 YIF1AO95070 293 aa12.14□□□□□ -0.47
VARS-216ENST00000428445 TGFBR1P36897 503 aa12.14□□□□□ -0.47
VARS-216ENST00000428445 UBE2NLQ5JXB2 153 aa12.14□□□□□ -0.47
VARS-216ENST00000428445 LGALS9CQ6DKI2 356 aa12.14□□□□□ -0.47
VARS-216ENST00000428445 TMEM217Q8N7C4 229 aa12.14□□□□□ -0.47
VARS-216ENST00000428445 OR1P1Q8NH06 330 aa12.14□□□□□ -0.47
VARS-216ENST00000428445 TXN2Q99757 166 aa12.14□□□□□ -0.47
VARS-216ENST00000428445 IGHV7-4-1A0A0J9YVY3 117 aa12.13□□□□□ -0.47
VARS-216ENST00000428445 CD5P06127 495 aa12.13□□□□□ -0.47
VARS-216ENST00000428445 PRSS3P35030 304 aa12.13□□□□□ -0.47
VARS-216ENST00000428445 RELQ04864 619 aaPredicted RBP12.13□□□□□ -0.47
VARS-216ENST00000428445 KCTD21Q4G0X4 260 aa12.13□□□□□ -0.47
VARS-216ENST00000428445 LILRB2Q8N423 598 aa12.13□□□□□ -0.47
VARS-216ENST00000428445 TMEM116Q8NCL8 245 aa12.13□□□□□ -0.47
VARS-216ENST00000428445 OR5H2Q8NGV7 314 aa12.13□□□□□ -0.47
VARS-216ENST00000428445 OR11H2Q8NH07 326 aa12.13□□□□□ -0.47
VARS-216ENST00000428445 SLC25A46Q96AG3 418 aa12.13□□□□□ -0.47
VARS-216ENST00000428445 MISP3Q96FF7 219 aa12.13□□□□□ -0.47
VARS-216ENST00000428445 CMTM3Q96MX0 182 aa12.13□□□□□ -0.47
VARS-216ENST00000428445 C6orf62Q9GZU0 229 aaPredicted RBP12.13□□□□□ -0.47
VARS-216ENST00000428445 TMEM14BQ9NUH8 114 aa12.13□□□□□ -0.47
VARS-216ENST00000428445 MPTX1A8MV57 137 aa12.12□□□□□ -0.47
VARS-216ENST00000428445 APOHP02749 345 aaPredicted RBP12.12□□□□□ -0.47
VARS-216ENST00000428445 NEDD8Q15843 81 aa12.12□□□□□ -0.47
VARS-216ENST00000428445 TMEM69Q5SWH9 247 aa12.12□□□□□ -0.47
VARS-216ENST00000428445 C11orf45Q8TAV5 145 aa12.12□□□□□ -0.47
VARS-216ENST00000428445 AGRNO00468 2067 aa12.11□□□□□ -0.47
VARS-216ENST00000428445 IGHV3-66A0A0C4DH42 116 aa12.11□□□□□ -0.47
VARS-216ENST00000428445 NUPL2O15504 423 aaKnown RBP12.11□□□□□ -0.47
VARS-216ENST00000428445 RPS19P39019 145 aaKnown RBP12.11□□□□□ -0.47
VARS-216ENST00000428445 MFAP4P55083 255 aa12.11□□□□□ -0.47
VARS-216ENST00000428445 TAS2R20P59543 309 aa12.11□□□□□ -0.47
VARS-216ENST00000428445 PHLDA2Q53GA4 152 aa12.11□□□□□ -0.47
VARS-216ENST00000428445 FAM90A2PQ658T7 463 aa12.11□□□□□ -0.47
VARS-216ENST00000428445 LEMD1Q68G75 181 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms