RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TRAV26-1A0A087WT03 109 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 FGF6P10767 208 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 CA6P23280 308 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 CRYBA4P53673 196 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 LYSMD4Q5XG99 296 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 FOXI2Q6ZQN5 318 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 LRRC29Q8WV35 223 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 CDX2Q99626 313 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-206ENST00000428313 PKIBQ9C010 78 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 IDI2-AS1Q9NZ38 188 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 ZNF257Q9Y2Q1 563 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 GGTLC3B5MD39 225 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 J3QR89 54 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 VDAC2P45880 294 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-206ENST00000428313 RPL24P83731 157 aaKnown RBP13.25□□□□□ -0.29
C9orf3-206ENST00000428313 PRR20EP86478 221 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 PRR20CP86479 221 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 PRR20DP86480 221 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 PRR20BP86481 221 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 PRR20AP86496 221 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 PARM1Q6UWI2 310 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 MIR17HGQ75NE6 70 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 MRPL21Q7Z2W9 205 aaKnown RBP13.25□□□□□ -0.29
C9orf3-206ENST00000428313 FAM222BQ8WU58 562 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 SPACA9Q96E40 222 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-206ENST00000428313 PERPQ96FX8 193 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 POM121L2Q96KW2 1035 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 NCKAP5O14513 1909 aa13.25□□□□□ -0.29
C9orf3-206ENST00000428313 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.24□□□□□ -0.29
C9orf3-206ENST00000428313 DNPH1O43598 174 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 ZFAND5O76080 213 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 DKK1O94907 266 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 FABP2P12104 132 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 SSX8Q7RTT4 187 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 MTURNQ8N3F0 131 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 ZNF808Q8N4W9 903 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-206ENST00000428313 UBALD1Q8TB05 177 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 SNRNP40Q96DI7 357 aaKnown RBP13.24□□□□□ -0.29
C9orf3-206ENST00000428313 ZNF355PQ9NSJ1 428 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 ANKRD30BLA7E2S9 258 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 SIVA1O15304 175 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 FOXE3Q13461 319 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 OR9G4Q8NGQ1 327 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 HEYLQ9NQ87 328 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-206ENST00000428313 XIRP2A4UGR9 3374 aa13.24□□□□□ -0.29
C9orf3-206ENST00000428313 IGHV4-34P06331 123 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 MEF2CQ06413 473 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-206ENST00000428313 OR4A16Q8NH70 328 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 FER1L6-AS2Q96M78 137 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 RPP25Q9BUL9 199 aaKnown RBP13.23□□□□□ -0.29
C9orf3-206ENST00000428313 PLEKHA3Q9HB20 300 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 RABAC1Q9UI14 185 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 COLQQ9Y215 455 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-206ENST00000428313 LOXL2Q9Y4K0 774 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 TSSC4Q9Y5U2 329 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-206ENST00000428313 DNAH14Q0VDD8 3507 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 ZNF207O43670 478 aaKnown RBP13.23□□□□□ -0.29
C9orf3-206ENST00000428313 GFRA3O60609 400 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 AGFG2O95081 481 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 MYF5P13349 255 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 CAMPP49913 170 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 FABP6P51161 128 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 HBBP68871 147 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 CEACAM16Q2WEN9 425 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 CCDC144NLQ6NUI1 221 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 SPEM1Q8N4L4 309 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 TEX45Q8NA69 505 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 STXBP6Q8NFX7 210 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 MRAP2Q96G30 205 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 SOX21Q9Y651 276 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-206ENST00000428313 USF3Q68DE3 2245 aa13.23□□□□□ -0.29
C9orf3-206ENST00000428313 MED12LQ86YW9 2145 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 HIGD1CA8MV81 97 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 GNG3P63215 75 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 TSTD1Q8NFU3 115 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 OR4X2Q8NGF9 303 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 RLN3Q8WXF3 142 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 BADQ92934 168 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 HSD17B10Q99714 261 aaKnown RBP13.22□□□□□ -0.29
C9orf3-206ENST00000428313 SRXN1Q9BYN0 137 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 GCM1Q9NP62 436 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 IGLV3-12A0A075B6K2 115 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 A0A0J9YW62 118 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 FAM87AP0C7U9 286 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 TMEM95Q3KNT9 176 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 AAED1Q7RTV5 226 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 ZNF503Q96F45 646 aa13.22□□□□□ -0.29
C9orf3-206ENST00000428313 CHCHD2Q9Y6H1 151 aaPredicted RBP13.22□□□□□ -0.29
C9orf3-206ENST00000428313 FNDC10F2Z333 226 aa13.21□□□□□ -0.29
C9orf3-206ENST00000428313 OR2H2O95918 312 aa13.21□□□□□ -0.29
C9orf3-206ENST00000428313 TAS2R45P59539 299 aa13.21□□□□□ -0.29
C9orf3-206ENST00000428313 ZXDAP98168 799 aa13.21□□□□□ -0.29
C9orf3-206ENST00000428313 NRN1LQ496H8 165 aa13.21□□□□□ -0.29
C9orf3-206ENST00000428313 BOD1L2Q8IYS8 172 aa13.21□□□□□ -0.29
C9orf3-206ENST00000428313 GALMQ96C23 342 aa13.21□□□□□ -0.29
C9orf3-206ENST00000428313 SS18L1O75177 396 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-206ENST00000428313 IGLV3-19P01714 112 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 C5orf64Q2M2E5 130 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 TIMM23BQ5SRD1 257 aa13.2□□□□□ -0.3
C9orf3-206ENST00000428313 C17orf82Q86X59 251 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms