RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 FAM208BQ5VWN6 2430 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 TGIF2-C20orf24A0A0A6YYL0 155 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 IGKV1D-13A0A0B4J2D9 117 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 IGKV3D-20A0A0C4DH25 116 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 IGKV1-13P0DP09 117 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 LINC00114Q6XXX2 140 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 USF3Q68DE3 2245 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 IFITM10A6NMD0 228 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 LINC00312Q9Y6C7 94 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 PCNX2A6NKB5 2137 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 TRGC2P03986 189 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 PRSS2P07478 247 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 CD55P08174 381 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 MST1P26927 711 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 ZNF660Q6AZW8 331 aaPredicted RBP8.13□□□□□ -1.11
SNX13-203ENST00000428135 OR11H4Q8NGC9 324 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 PHF3Q92576 2039 aaKnown RBP8.13□□□□□ -1.11
SNX13-203ENST00000428135 TRAV24A0A0B4J272 114 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 NPIPB13A6NJU9 1138 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 NPIPB4C9JG80 1138 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 FBLIM1Q8WUP2 373 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 SMIM12Q96EX1 92 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 IFI27L2Q9H2X8 130 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 TM4SF5O14894 197 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 NPFFO15130 113 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 MLNRO43193 412 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 LILRA1O75019 489 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 ZNF345Q14585 488 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 VMO1Q7Z5L0 202 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 ATOH7Q8N100 152 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 RPRMLQ8N4K4 120 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 NPFFR1Q9GZQ6 430 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 MPDZO75970 2070 aa8.13□□□□□ -1.11
SNX13-203ENST00000428135 IGKV1-9A0A0C4DH69 117 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 C5orf63A6NC05 138 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 GCHFRP30047 84 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 RIPPLY3P57055 190 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 RND3P61587 244 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 TEX45Q8NA69 505 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 C8orf46Q8TAG6 207 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 MRPL13Q9BYD1 178 aaKnown RBP8.12□□□□□ -1.11
SNX13-203ENST00000428135 F11RQ9Y624 299 aaKnown RBP8.12□□□□□ -1.11
SNX13-203ENST00000428135 TECTAO75443 2155 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 TSPOP30536 169 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 C2orf68Q2NKX9 166 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 FAM71F2Q6NXP2 309 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 CLDND2Q8NHS1 167 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 C18orf15Q96N68 181 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 PKDREJQ9NTG1 2253 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 TRGV2A0A075B6R0 118 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 B4DEV8 164 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 NBR2O15453 112 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 COMPP49747 757 aaPredicted RBP8.12□□□□□ -1.11
SNX13-203ENST00000428135 HSPB9Q9BQS6 159 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 TMEM133Q9H2Q1 129 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 NPDC1Q9NQX5 325 aaPredicted RBP8.12□□□□□ -1.11
SNX13-203ENST00000428135 CRIM1Q9NZV1 1036 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 C7orf71A4D174 169 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 DIRC3C9JPN6 131 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 ZNF25P17030 456 aaPredicted RBP8.12□□□□□ -1.11
SNX13-203ENST00000428135 FOXA3P55318 350 aaPredicted RBP8.12□□□□□ -1.11
SNX13-203ENST00000428135 RPL24P83731 157 aaKnown RBP8.12□□□□□ -1.11
SNX13-203ENST00000428135 CENPWQ5EE01 88 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 LDLRAD2Q5SZI1 272 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 ZNF525Q8N782 197 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 OR10W1Q8NGF6 305 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 MOB4Q9Y3A3 225 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 SMIM8Q96KF7 97 aa8.12□□□□□ -1.11
SNX13-203ENST00000428135 MRPS18CQ9Y3D5 142 aaKnown RBP8.12□□□□□ -1.11
SNX13-203ENST00000428135 TRBV20OR9-2A0A075B6H5 130 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 A0A0G2JLM5 398 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 PPP1R17O96001 155 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 NUTF2P61970 127 aaKnown RBP8.11□□□□□ -1.11
SNX13-203ENST00000428135 GNG5P63218 68 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 ZNF585BQ52M93 769 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 C10orf55Q5SWW7 151 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 MIR17HGQ75NE6 70 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 ZNF329Q86UD4 541 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 STHQ8IWL8 128 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 PRSS22Q9GZN4 317 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 MRPL18Q9H0U6 180 aaKnown RBP8.11□□□□□ -1.11
SNX13-203ENST00000428135 FRMPD3Q5JV73 1810 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 PLXNA3P51805 1871 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 NBEAP1P0C6P0 100 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 RHOGP84095 191 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 OSR1Q8TAX0 266 aaPredicted RBP8.11□□□□□ -1.11
SNX13-203ENST00000428135 KIAA2026Q5HYC2 2103 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 SLC17A3O00476 420 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 ACAA1P09110 424 aaPredicted RBP8.11□□□□□ -1.11
SNX13-203ENST00000428135 SRSF7Q16629 238 aaKnown RBP eCLIP8.11□□□□□ -1.11
SNX13-203ENST00000428135 PRR31Q5SQ13 230 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 PARLQ9H300 379 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 NOTCH2Q04721 2471 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 PPIFP30405 207 aaKnown RBP8.11□□□□□ -1.11
SNX13-203ENST00000428135 RPS11P62280 158 aaKnown RBP eCLIP8.11□□□□□ -1.11
SNX13-203ENST00000428135 MORN2Q502X0 79 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 ZNF383Q8NA42 475 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 GALNT14Q96FL9 552 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 NPCDR1Q9BY65 106 aa8.11□□□□□ -1.11
SNX13-203ENST00000428135 K7ENP7 123 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms