RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 CHRDL1Q9BU40 450 aa20.36■□□□□ 0.85
LMO1-202ENST00000428101 NAA50Q9GZZ1 169 aaKnown RBP20.36■□□□□ 0.85
LMO1-202ENST00000428101 C21orf62Q9NYP8 219 aa20.36■□□□□ 0.85
LMO1-202ENST00000428101 S100GP29377 79 aa20.35■□□□□ 0.85
LMO1-202ENST00000428101 ANKRD55Q3KP44 614 aa20.35■□□□□ 0.85
LMO1-202ENST00000428101 SLC38A6Q8IZM9 456 aa20.35■□□□□ 0.85
LMO1-202ENST00000428101 TMEM56Q96MV1 263 aa20.35■□□□□ 0.85
LMO1-202ENST00000428101 ATP6V0BQ99437 205 aa20.35■□□□□ 0.85
LMO1-202ENST00000428101 TSC22D3Q99576 134 aa20.35■□□□□ 0.85
LMO1-202ENST00000428101 M0QYG6 137 aa20.34■□□□□ 0.85
LMO1-202ENST00000428101 ADMP35318 185 aa20.34■□□□□ 0.85
LMO1-202ENST00000428101 CTF1Q16619 201 aa20.34■□□□□ 0.85
LMO1-202ENST00000428101 SPSB3Q6PJ21 355 aa20.34■□□□□ 0.85
LMO1-202ENST00000428101 RBPMS2Q6ZRY4 209 aaKnown RBP20.34■□□□□ 0.85
LMO1-202ENST00000428101 C5orf66Q9H5L9 145 aa20.34■□□□□ 0.85
LMO1-202ENST00000428101 SMIM18P0DKX4 95 aa20.33■□□□□ 0.85
LMO1-202ENST00000428101 OR1L6Q8NGR2 347 aa20.33■□□□□ 0.85
LMO1-202ENST00000428101 NDUFA4O00483 81 aa20.32■□□□□ 0.84
LMO1-202ENST00000428101 OR1P1Q8NH06 330 aa20.32■□□□□ 0.84
LMO1-202ENST00000428101 ZNF414Q96IQ9 312 aa20.32■□□□□ 0.84
LMO1-202ENST00000428101 DAZ1Q9NQZ3 744 aaKnown RBP20.32■□□□□ 0.84
LMO1-202ENST00000428101 KLK11Q9UBX7 282 aa20.32■□□□□ 0.84
LMO1-202ENST00000428101 FAM25AB3EWG3 89 aa20.31■□□□□ 0.84
LMO1-202ENST00000428101 FAM25CB3EWG5 89 aa20.31■□□□□ 0.84
LMO1-202ENST00000428101 FAM25GB3EWG6 89 aa20.31■□□□□ 0.84
LMO1-202ENST00000428101 GABARAPO95166 117 aa20.31■□□□□ 0.84
LMO1-202ENST00000428101 RNASE12Q5GAN4 147 aaKnown RBP20.31■□□□□ 0.84
LMO1-202ENST00000428101 MZT2AQ6P582 158 aa20.31■□□□□ 0.84
LMO1-202ENST00000428101 H2BFWTQ7Z2G1 175 aa20.31■□□□□ 0.84
LMO1-202ENST00000428101 OR2C3Q8N628 320 aa20.31■□□□□ 0.84
LMO1-202ENST00000428101 UBAC2Q8NBM4 344 aa20.31■□□□□ 0.84
LMO1-202ENST00000428101 MRGPRFQ96AM1 343 aa20.31■□□□□ 0.84
LMO1-202ENST00000428101 OR4A16Q8NH70 328 aa20.3■□□□□ 0.84
LMO1-202ENST00000428101 GGTLC1Q9BX51 225 aa20.3■□□□□ 0.84
LMO1-202ENST00000428101 DNAH1Q9P2D7 4330 aa20.3■□□□□ 0.84
LMO1-202ENST00000428101 IGHV3OR16-8A0A075B7F1 116 aa20.29■□□□□ 0.84
LMO1-202ENST00000428101 LOC102724200A0A096LPH7 203 aaPredicted RBP20.29■□□□□ 0.84
LMO1-202ENST00000428101 TSPAN4O14817 238 aa20.29■□□□□ 0.84
LMO1-202ENST00000428101 CTSGP08311 255 aa20.29■□□□□ 0.84
LMO1-202ENST00000428101 Q56UQ5 140 aa20.29■□□□□ 0.84
LMO1-202ENST00000428101 LHFPL1Q86WI0 220 aa20.29■□□□□ 0.84
LMO1-202ENST00000428101 OR52I2Q8NH67 350 aa20.29■□□□□ 0.84
LMO1-202ENST00000428101 SPAG8Q99932 426 aaPredicted RBP20.29■□□□□ 0.84
LMO1-202ENST00000428101 C20orf24Q9BUV8 137 aa20.29■□□□□ 0.84
LMO1-202ENST00000428101 I3L2K1 104 aa20.28■□□□□ 0.84
LMO1-202ENST00000428101 K7EMT4 169 aa20.28■□□□□ 0.84
LMO1-202ENST00000428101 ZNF182P17025 639 aaPredicted RBP20.28■□□□□ 0.84
LMO1-202ENST00000428101 RND3P61587 244 aa20.28■□□□□ 0.84
LMO1-202ENST00000428101 PRCDQ00LT1 54 aa20.28■□□□□ 0.84
LMO1-202ENST00000428101 AP3S1Q92572 193 aa20.28■□□□□ 0.84
LMO1-202ENST00000428101 EXTL2Q9UBQ6 330 aa20.28■□□□□ 0.84
LMO1-202ENST00000428101 ZNF207O43670 478 aaKnown RBP20.27■□□□□ 0.84
LMO1-202ENST00000428101 CD3DP04234 171 aa20.27■□□□□ 0.84
LMO1-202ENST00000428101 PI3P19957 117 aa20.27■□□□□ 0.84
LMO1-202ENST00000428101 HSPE1P61604 102 aaKnown RBP20.27■□□□□ 0.84
LMO1-202ENST00000428101 IZUMO4Q1ZYL8 232 aa20.27■□□□□ 0.84
LMO1-202ENST00000428101 ZNF114Q8NC26 417 aa20.27■□□□□ 0.84
LMO1-202ENST00000428101 MISP3Q96FF7 219 aa20.27■□□□□ 0.84
LMO1-202ENST00000428101 ABHD1Q96SE0 405 aa20.27■□□□□ 0.84
LMO1-202ENST00000428101 OVOL2Q9BRP0 275 aa20.27■□□□□ 0.84
LMO1-202ENST00000428101 MTFP1Q9UDX5 166 aa20.27■□□□□ 0.84
LMO1-202ENST00000428101 FCGR2BP31994 310 aaPredicted RBP20.26■□□□□ 0.83
LMO1-202ENST00000428101 RNASE10Q5GAN6 216 aaKnown RBP20.26■□□□□ 0.83
LMO1-202ENST00000428101 GPR107Q5VW38 600 aa20.26■□□□□ 0.83
LMO1-202ENST00000428101 IL17DQ8TAD2 202 aa20.26■□□□□ 0.83
LMO1-202ENST00000428101 ZNF486Q96H40 463 aaPredicted RBP20.26■□□□□ 0.83
LMO1-202ENST00000428101 UBQLN2Q9UHD9 624 aa20.26■□□□□ 0.83
LMO1-202ENST00000428101 C15orf62A8K5M9 175 aa20.25■□□□□ 0.83
LMO1-202ENST00000428101 IGKV1-5P01602 117 aa20.25■□□□□ 0.83
LMO1-202ENST00000428101 PGAM2P15259 253 aa20.25■□□□□ 0.83
LMO1-202ENST00000428101 PIGPP57054 158 aa20.25■□□□□ 0.83
LMO1-202ENST00000428101 LAMTOR1Q6IAA8 161 aa20.25■□□□□ 0.83
LMO1-202ENST00000428101 ARRDC1Q8N5I2 433 aa20.25■□□□□ 0.83
LMO1-202ENST00000428101 TP53RKQ96S44 253 aa20.25■□□□□ 0.83
LMO1-202ENST00000428101 P0C879 139 aa20.24■□□□□ 0.83
LMO1-202ENST00000428101 OR4D10Q8NGI6 311 aa20.24■□□□□ 0.83
LMO1-202ENST00000428101 NUPL2O15504 423 aaKnown RBP20.23■□□□□ 0.83
LMO1-202ENST00000428101 MT-CO2P00403 227 aa20.23■□□□□ 0.83
LMO1-202ENST00000428101 IGHV3-48P01763 117 aa20.23■□□□□ 0.83
LMO1-202ENST00000428101 TBPP20226 339 aa20.23■□□□□ 0.83
LMO1-202ENST00000428101 MFAP4P55083 255 aa20.23■□□□□ 0.83
LMO1-202ENST00000428101 ODF3L2Q3SX64 289 aa20.23■□□□□ 0.83
LMO1-202ENST00000428101 TXN2Q99757 166 aa20.23■□□□□ 0.83
LMO1-202ENST00000428101 SMPXQ9UHP9 88 aa20.23■□□□□ 0.83
LMO1-202ENST00000428101 HYDINQ4G0P3 5121 aa20.23■□□□□ 0.83
LMO1-202ENST00000428101 A0A0B4J293 547 aa20.22■□□□□ 0.83
LMO1-202ENST00000428101 RELQ04864 619 aaPredicted RBP20.22■□□□□ 0.83
LMO1-202ENST00000428101 SPINK9Q5DT21 86 aa20.22■□□□□ 0.83
LMO1-202ENST00000428101 OR10C1Q96KK4 312 aa20.22■□□□□ 0.83
LMO1-202ENST00000428101 NXF2Q9GZY0 626 aaKnown RBP20.22■□□□□ 0.83
LMO1-202ENST00000428101 MIXL1Q9H2W2 232 aa20.22■□□□□ 0.83
LMO1-202ENST00000428101 PLECQ15149 4684 aaKnown RBP20.21■□□□□ 0.83
LMO1-202ENST00000428101 CD74P04233 296 aa20.21■□□□□ 0.83
LMO1-202ENST00000428101 CTSDP07339 412 aaPredicted RBP20.21■□□□□ 0.83
LMO1-202ENST00000428101 ERHP84090 104 aaKnown RBP20.21■□□□□ 0.83
LMO1-202ENST00000428101 TMEM229BQ8NBD8 167 aa20.21■□□□□ 0.83
LMO1-202ENST00000428101 RNF2Q99496 336 aa20.21■□□□□ 0.83
LMO1-202ENST00000428101 IGHV7-4-1A0A0J9YVY3 117 aa20.2■□□□□ 0.82
LMO1-202ENST00000428101 C3orf85A0A1B0GTC6 90 aa20.2■□□□□ 0.82
LMO1-202ENST00000428101 CHEK1O14757 476 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms