RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 RPL22L1Q6P5R6 122 aaKnown RBP1.25□□□□□ -2.21
GCFC2-203ENST00000427862 UNQ6190/PRO20217Q6UXQ8 127 aa1.25□□□□□ -2.21
GCFC2-203ENST00000427862 RASSF5Q8WWW0 418 aa1.25□□□□□ -2.21
GCFC2-203ENST00000427862 KLK6Q92876 244 aa1.25□□□□□ -2.21
GCFC2-203ENST00000427862 DERL1Q9BUN8 251 aa1.25□□□□□ -2.21
GCFC2-203ENST00000427862 PARD6GQ9BYG4 376 aaPredicted RBP1.25□□□□□ -2.21
GCFC2-203ENST00000427862 YIPF3Q9GZM5 350 aa1.25□□□□□ -2.21
GCFC2-203ENST00000427862 PRTFDC1Q9NRG1 225 aa1.25□□□□□ -2.21
GCFC2-203ENST00000427862 MED9Q9NWA0 146 aa1.25□□□□□ -2.21
GCFC2-203ENST00000427862 CMTM6Q9NX76 183 aa1.25□□□□□ -2.21
GCFC2-203ENST00000427862 STRCQ7RTU9 1775 aa1.25□□□□□ -2.21
GCFC2-203ENST00000427862 KMT2BQ9UMN6 2715 aaPredicted RBP1.24□□□□□ -2.21
GCFC2-203ENST00000427862 FREM1Q5H8C1 2179 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 KIF24Q5T7B8 1368 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 HLA-DRB1P01911 266 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 PMP2P02689 132 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 HIST1H1TP22492 207 aaPredicted RBP1.24□□□□□ -2.21
GCFC2-203ENST00000427862 HIST1H2BOP23527 126 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 HIST1H2BBP33778 126 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 EIF2B2P49770 351 aaKnown RBP1.24□□□□□ -2.21
GCFC2-203ENST00000427862 CEBPGP53567 150 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 HIST1H2BDP58876 126 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 HIST1H2BCP62807 126 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 ZNF345Q14585 488 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 HIST2H2BEQ16778 126 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 ACOT6Q3I5F7 207 aaPredicted RBP1.24□□□□□ -2.21
GCFC2-203ENST00000427862 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.24□□□□□ -2.21
GCFC2-203ENST00000427862 OR13C4Q8NGS5 318 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 C10orf105Q8TEF2 133 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 HIST1H2BHQ93079 126 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 TMEM106AQ96A25 262 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 HIST1H2BNQ99877 126 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 HIST1H2BMQ99879 126 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 COMMD5Q9GZQ3 224 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 FBXL12Q9NXK8 326 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 SOX21Q9Y651 276 aaPredicted RBP1.24□□□□□ -2.21
GCFC2-203ENST00000427862 TENM1Q9UKZ4 2725 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 SNAPC4Q5SXM2 1469 aa1.24□□□□□ -2.21
GCFC2-203ENST00000427862 TONSLQ96HA7 1378 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 IGKV3D-7A0A0C4DH55 119 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 IGKV3OR2-268A0A0C4DH90 116 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 SERPINA6P08185 405 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 UBBP0CG47 229 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 OMPP47874 163 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 SNRPD2P62316 118 aaKnown RBP1.23□□□□□ -2.21
GCFC2-203ENST00000427862 HBA1P69905 142 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 SPANXN3Q5MJ09 141 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 OR8J2Q8NGG1 315 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 DCUN1D1Q96GG9 259 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 PPP1R2P1Q96PQ5 205 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 NIPSNAP1Q9BPW8 284 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 ADAT1Q9BUB4 502 aaKnown RBP1.23□□□□□ -2.21
GCFC2-203ENST00000427862 GREB1Q4ZG55 1949 aa1.23□□□□□ -2.21
GCFC2-203ENST00000427862 IGKV2-40A0A087WW87 121 aaPredicted RBP1.22□□□□□ -2.21
GCFC2-203ENST00000427862 GOLGA6L19H0YKK7 550 aa1.22□□□□□ -2.21
GCFC2-203ENST00000427862 CHP2O43745 196 aa1.22□□□□□ -2.21
GCFC2-203ENST00000427862 IGKV1-5P01602 117 aa1.22□□□□□ -2.21
GCFC2-203ENST00000427862 IGKV2D-40P01614 121 aaPredicted RBP1.22□□□□□ -2.21
GCFC2-203ENST00000427862 ITGB3BPQ13352 177 aaPredicted RBP1.22□□□□□ -2.21
GCFC2-203ENST00000427862 KISS1Q15726 138 aa1.22□□□□□ -2.21
GCFC2-203ENST00000427862 RGS21Q2M5E4 152 aa1.22□□□□□ -2.21
GCFC2-203ENST00000427862 LPCAT3Q6P1A2 487 aa1.22□□□□□ -2.21
GCFC2-203ENST00000427862 AAED1Q7RTV5 226 aa1.22□□□□□ -2.21
GCFC2-203ENST00000427862 WFDC11Q8NEX6 87 aa1.22□□□□□ -2.21
GCFC2-203ENST00000427862 CCDC42Q96M95 316 aa1.22□□□□□ -2.21
GCFC2-203ENST00000427862 SCGB3A1Q96QR1 104 aa1.22□□□□□ -2.21
GCFC2-203ENST00000427862 MRPL27Q9P0M9 148 aaKnown RBP1.22□□□□□ -2.21
GCFC2-203ENST00000427862 BAZ2BQ9UIF8 2168 aaKnown RBP1.22□□□□□ -2.21
GCFC2-203ENST00000427862 DIDO1Q9BTC0 2240 aaKnown RBP1.21□□□□□ -2.21
GCFC2-203ENST00000427862 MYH11P35749 1972 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 BRWD1Q9NSI6 2320 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 PQLC2LA1A4F0 135 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 CLDN24A6NM45 220 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 FAAHO00519 579 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 RPP14O95059 124 aaKnown RBP1.21□□□□□ -2.22
GCFC2-203ENST00000427862 IFNA10P01566 189 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 IL9P15248 144 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 RPL5P46777 297 aaKnown RBP1.21□□□□□ -2.22
GCFC2-203ENST00000427862 CDK5R1Q15078 307 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 KCNJ8Q15842 424 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 SPOPLQ6IQ16 392 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 LCN15Q6UWW0 184 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 TRAPPC5Q8IUR0 188 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 ANKRD29Q8N6D5 301 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 CLDN22Q8N7P3 220 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 C15orf53Q8NAA6 179 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 ZNF439Q8NDP4 499 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 ULBP3Q9BZM4 244 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 CKLFQ9UBR5 152 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 PKIGQ9Y2B9 76 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 TMEM56-RWDD3S4R434 201 aa1.21□□□□□ -2.22
GCFC2-203ENST00000427862 TTC21AQ8NDW8 1320 aa1.2□□□□□ -2.22
GCFC2-203ENST00000427862 IGKV3-7A0A075B6H7 116 aa1.2□□□□□ -2.22
GCFC2-203ENST00000427862 IGKV1D-43A0A0B4J1Z2 117 aa1.2□□□□□ -2.22
GCFC2-203ENST00000427862 OR4C46A6NHA9 309 aa1.2□□□□□ -2.22
GCFC2-203ENST00000427862 KPNA3O00505 521 aaPredicted RBP1.2□□□□□ -2.22
GCFC2-203ENST00000427862 CLPSP04118 112 aa1.2□□□□□ -2.22
GCFC2-203ENST00000427862 HTR1AP08908 422 aa1.2□□□□□ -2.22
GCFC2-203ENST00000427862 RUNX1Q01196 453 aa1.2□□□□□ -2.22
GCFC2-203ENST00000427862 BPIFA4PQ86YQ2 179 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms