RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 IL18Q14116 193 aa8.13□□□□□ -1.11
LINC01238-202ENST00000426962 MEF2DQ14814 521 aa8.13□□□□□ -1.11
LINC01238-202ENST00000426962 SPSB3Q6PJ21 355 aa8.13□□□□□ -1.11
LINC01238-202ENST00000426962 CCDC71LQ8N9Z2 235 aa8.13□□□□□ -1.11
LINC01238-202ENST00000426962 UXS1Q8NBZ7 420 aa8.13□□□□□ -1.11
LINC01238-202ENST00000426962 OR1P1Q8NH06 330 aa8.13□□□□□ -1.11
LINC01238-202ENST00000426962 SMIM4Q8WVI0 70 aa8.13□□□□□ -1.11
LINC01238-202ENST00000426962 BSCL2Q96G97 398 aaPredicted RBP8.13□□□□□ -1.11
LINC01238-202ENST00000426962 RCHY1Q96PM5 261 aa8.13□□□□□ -1.11
LINC01238-202ENST00000426962 TP53RKQ96S44 253 aa8.13□□□□□ -1.11
LINC01238-202ENST00000426962 SLC2A8Q9NY64 477 aa8.13□□□□□ -1.11
LINC01238-202ENST00000426962 COPZ2Q9P299 210 aa8.13□□□□□ -1.11
LINC01238-202ENST00000426962 DISC1C4P0D8 188 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 K7EIM0 57 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 B3GALNT1O75752 331 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 CTSDP07339 412 aaPredicted RBP8.12□□□□□ -1.11
LINC01238-202ENST00000426962 AKAIN1P0CW23 69 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 C8orf88P0DMB2 117 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 EDN2P20800 178 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 PPP5CP53041 499 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 CD81P60033 236 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 ERHP84090 104 aaKnown RBP8.12□□□□□ -1.11
LINC01238-202ENST00000426962 PRCDQ00LT1 54 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 GUCA2BQ16661 112 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 TM4SF20Q53R12 229 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 ZNF57Q68EA5 555 aaPredicted RBP8.12□□□□□ -1.11
LINC01238-202ENST00000426962 UNQ9165/PRO28630Q6UXU0 137 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 OR2C3Q8N628 320 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 OR13C8Q8NGS7 320 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 MARCH1Q8TCQ1 289 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 SCARB1Q8WTV0 552 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 CACNG8Q8WXS5 425 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 MARC2Q969Z3 335 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 NEURL2Q9BR09 285 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 TM2D3Q9BRN9 247 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 ZNF436Q9C0F3 470 aaPredicted RBP8.12□□□□□ -1.11
LINC01238-202ENST00000426962 SLIRPQ9GZT3 109 aaKnown RBP8.12□□□□□ -1.11
LINC01238-202ENST00000426962 C6orf62Q9GZU0 229 aaPredicted RBP8.12□□□□□ -1.11
LINC01238-202ENST00000426962 C21orf62Q9NYP8 219 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 MRPL27Q9P0M9 148 aaKnown RBP8.12□□□□□ -1.11
LINC01238-202ENST00000426962 UFC1Q9Y3C8 167 aa8.12□□□□□ -1.11
LINC01238-202ENST00000426962 IGHV3-21A0A0B4J1V1 117 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 A0A0B4J293 547 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 IGHV3-35A0A0C4DH35 117 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 OR2T8A6NH00 312 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 H3BMQ9 156 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 GSTZ1O43708 216 aaPredicted RBP8.11□□□□□ -1.11
LINC01238-202ENST00000426962 IGKV1-5P01602 117 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 CD7P09564 240 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 AKR1C2P52895 323 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 SURF2Q15527 256 aaPredicted RBP8.11□□□□□ -1.11
LINC01238-202ENST00000426962 HAGHQ16775 308 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 IZUMO4Q1ZYL8 232 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 SP6Q3SY56 376 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 ZNF114Q8NC26 417 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 ISOC1Q96CN7 298 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 WDR89Q96FK6 387 aaPredicted RBP8.11□□□□□ -1.11
LINC01238-202ENST00000426962 RTBDNQ9BSG5 229 aaPredicted RBP8.11□□□□□ -1.11
LINC01238-202ENST00000426962 GAR1Q9NY12 217 aaKnown RBP8.11□□□□□ -1.11
LINC01238-202ENST00000426962 MLXQ9UH92 298 aa8.11□□□□□ -1.11
LINC01238-202ENST00000426962 RSL24D1Q9UHA3 163 aaKnown RBP8.11□□□□□ -1.11
LINC01238-202ENST00000426962 C14orf166Q9Y224 244 aaKnown RBP8.11□□□□□ -1.11
LINC01238-202ENST00000426962 TRAV25A0A0B4J276 109 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 TEX13DA0A0J9YY54 714 aaPredicted RBP8.1□□□□□ -1.11
LINC01238-202ENST00000426962 FABP12A6NFH5 140 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 F8W735 103 aaPredicted RBP8.1□□□□□ -1.11
LINC01238-202ENST00000426962 C3orf84H3BNL1 204 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 NDUFA4O00483 81 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 IFNA17P01571 189 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 P0C879 139 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 UCP1P25874 307 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 TNFSF8P32971 234 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 MFAP4P55083 255 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 TRIM16LQ309B1 348 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 ANKRD55Q3KP44 614 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 Q56UQ5 140 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 FAAP20Q6NZ36 180 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 UBAC2Q8NBM4 344 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 OR4C16Q8NGL9 310 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 MCFD2Q8NI22 146 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 RRNAD1Q96FB5 475 aaKnown RBP8.1□□□□□ -1.11
LINC01238-202ENST00000426962 MISP3Q96FF7 219 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 TXN2Q99757 166 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 PRRT1Q99946 306 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 SOSTQ9BQB4 213 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 CHRDL1Q9BU40 450 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 NXF2Q9GZY0 626 aaKnown RBP8.1□□□□□ -1.11
LINC01238-202ENST00000426962 PLEKHA3Q9HB20 300 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 GPR132Q9UNW8 380 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 CEPT1Q9Y6K0 416 aa8.1□□□□□ -1.11
LINC01238-202ENST00000426962 ANKRD20A5PA0PJZ0 165 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 OR11H12B2RN74 326 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 INS-IGF2F8WCM5 200 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 I3L2K1 104 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 K7EMT4 169 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 ST8SIA3O43173 380 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 CDS2O95674 445 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 CTSGP08311 255 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 FCGR2BP31994 310 aaPredicted RBP8.09□□□□□ -1.11
LINC01238-202ENST00000426962 SNCAP37840 140 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms