RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 PPP1R1AQ13522 171 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 EXOSC2Q13868 293 aaKnown RBP9.7□□□□□ -0.86
GPC1-204ENST00000426280 TMEM268Q5VZI3 342 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 CTRB2Q6GPI1 263 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 H2BFWTQ7Z2G1 175 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 Q8N1Y9 231 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 GALNT14Q96FL9 552 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 FBXL7Q9UJT9 491 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 KCNIP3Q9Y2W7 256 aa9.7□□□□□ -0.86
GPC1-204ENST00000426280 IGLC7A0M8Q6 106 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 SNAPC5O75971 98 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 P0C879 139 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 VAMP1P23763 118 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 MAS1LP35410 378 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 MECP2P51608 486 aaKnown RBP9.69□□□□□ -0.86
GPC1-204ENST00000426280 MFAP2P55001 183 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 ASAH1Q13510 395 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 KLK9Q2XQG4 91 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 C15orf32Q32M92 178 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 TMEM128Q5BJH2 165 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 SLC25A42Q86VD7 318 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 OR9G4Q8NGQ1 327 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 RBPMSQ93062 196 aaKnown RBP9.69□□□□□ -0.86
GPC1-204ENST00000426280 CCDC140Q96MF4 163 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 OR4C12Q96R67 309 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 KLK9Q9UKQ9 250 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 ZNF257Q9Y2Q1 563 aa9.69□□□□□ -0.86
GPC1-204ENST00000426280 IGLV11-55A0A075B6I3 123 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 TRAV6A0A075B6T7 132 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 MFSD2BA6NFX1 497 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 FAM223BA6NKX1 122 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 B3GALNT1O75752 331 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 OR2C1O95371 312 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 SFT2D2O95562 160 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 TCRBP04435 133 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 ZP3P21754 424 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 WT1-ASQ06250 92 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 ANKRD55Q3KP44 614 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 Q6ZRM9 215 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 FAM223AQ8IWN6 122 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 SLC35G3Q8N808 338 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 NECAP1Q8NC96 275 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 OR4A16Q8NH70 328 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 RNASE11Q8TAA1 199 aaKnown RBP9.68□□□□□ -0.86
GPC1-204ENST00000426280 GPR146Q96CH1 333 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 TMEM56Q96MV1 263 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 HINT2Q9BX68 163 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 QTRT1Q9BXR0 403 aaKnown RBP9.68□□□□□ -0.86
GPC1-204ENST00000426280 COMMD5Q9GZQ3 224 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 C20orf85Q9H1P6 137 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 ZC4H2Q9NQZ6 224 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 OR51B2Q9Y5P1 312 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 TMEM56-RWDD3S4R434 201 aa9.68□□□□□ -0.86
GPC1-204ENST00000426280 A0A0B4J293 547 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 FAM240BA0A1B0GVZ2 78 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 C15orf61A6NNL5 157 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 SPINK9Q5DT21 86 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 MZT2BQ6NZ67 158 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 CLEC19AQ6UXS0 136 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 LYZL2Q7Z4W2 148 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 SBSPONQ8IVN8 264 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 CADM3Q8N126 398 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 OR52B4Q8NGK2 314 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 OR1L8Q8NGR8 309 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 RRNAD1Q96FB5 475 aaKnown RBP9.67□□□□□ -0.86
GPC1-204ENST00000426280 TMEM14BQ9NUH8 114 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 ZMAT5Q9UDW3 170 aaKnown RBP9.67□□□□□ -0.86
GPC1-204ENST00000426280 PRNDQ9UKY0 176 aa9.67□□□□□ -0.86
GPC1-204ENST00000426280 C9orf170A2RU37 121 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 ATG12O94817 140 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 OR4E1P0C645 316 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 TRAPPC2P0DI81 140 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 TRAPPC2BP0DI82 140 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 ANXA3P12429 323 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 RPEL1Q2QD12 228 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 LGI3Q8N145 548 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 ZNF414Q96IQ9 312 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 TSC22D3Q99576 134 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 ELOVL1Q9BW60 279 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 NDUFA4L2Q9NRX3 87 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 NUDT15Q9NV35 164 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 SMAD5-AS1Q9Y6J3 95 aa9.66□□□□□ -0.86
GPC1-204ENST00000426280 IGHV3-21A0A0B4J1V1 117 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 ST8SIA3O43173 380 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 NXPH3O95157 252 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 H2AFB2P0C5Z0 115 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 FRMD6-AS1P0C7T7 363 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 OR13C7P0DN81 318 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 UBE2MP61081 183 aaKnown RBP9.65□□□□□ -0.86
GPC1-204ENST00000426280 DHRS2Q13268 280 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 C4orf46Q504U0 113 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 NRARPQ7Z6K4 114 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 LYG2Q86SG7 212 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 ENKURQ8TC29 256 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 CACNG8Q8WXS5 425 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 IL22RA2Q969J5 263 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 CACNG5Q9UF02 275 aa9.65□□□□□ -0.86
GPC1-204ENST00000426280 A0A0B4J2A0 478 aa9.64□□□□□ -0.87
GPC1-204ENST00000426280 IGHV3-35A0A0C4DH35 117 aa9.64□□□□□ -0.87
GPC1-204ENST00000426280 ZNF785A8K8V0 405 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms