RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ZNF253O75346 499 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 CA1P00915 261 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 LINC00869P0C866 280 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 KIR2DS2P43631 304 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 AMTP48728 403 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 RAB7AP51149 207 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 TMEM183BQ1AE95 376 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 TNFSF13O75888 250 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 IGHV3-48P01763 117 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 C17orf58Q2M2W7 97 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 MBNL2Q5VZF2 373 aaKnown RBP6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 OR9G1Q8NH87 305 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 DDB2Q92466 427 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 CCL13Q99616 98 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 MIEN1Q9BRT3 115 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 TECRQ9NZ01 308 aaKnown RBP6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 CFAP47Q6ZTR5 3102 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 TRGV8A0A0C4DH27 118 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 PRR33A8MZF0 331 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 C9JCJ5 164 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 IGKV1-16P04430 117 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 PRR20EP86478 221 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 PRR20CP86479 221 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 PRR20DP86480 221 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 PRR20BP86481 221 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 PRR20AP86496 221 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 OR10W1Q8NGF6 305 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 CORO2AQ92828 525 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 SARAFQ96BY9 339 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 SNRNP40Q96DI7 357 aaKnown RBP6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 LINC00479Q96M42 142 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 SSBP3Q9BWW4 388 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 ZNF71Q9NQZ8 489 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 TMEM167BQ9NRX6 74 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 TMEM14BQ9NUH8 114 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 ZNF586Q9NXT0 402 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 FBXL7Q9UJT9 491 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 RNF114Q9Y508 228 aa6.17□□□□□ -1.42
SMARCC1-202ENST00000425518 IGKV1OR2-108A0A075B7D4 117 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 TRAV5A0A0B4J249 113 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 KBTBD11-OT1A0A1B0GTJ5 212 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 SRRM4A7MD48 611 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 DIRC3C9JPN6 131 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 MMP23AO75900 390 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 NTF3P20783 257 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 RPL19P84098 196 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 FAM19A2Q8N3H0 131 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 C11orf52Q96A22 123 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 SLC35D1Q9NTN3 355 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 FOXA2Q9Y261 457 aaPredicted RBP6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 TBL2Q9Y4P3 447 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 TET2Q6N021 2002 aaPredicted RBP6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 IGLV1-44P01699 117 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 IGHG3P01860 377 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 RPLP1P05386 114 aaKnown RBP6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 AREGP15514 252 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 SRIP30626 198 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 BRS3P32247 399 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 KLF3P57682 345 aaPredicted RBP6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 C1orf162Q8NEQ5 155 aaPredicted RBP6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 STARD4Q96DR4 205 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 PKDREJQ9NTG1 2253 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 GGTLC3B5MD39 225 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 GPX1P07203 203 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 SP9P0CG40 484 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 TFPI2P48307 235 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 GUSBP1Q15486 140 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 PRR31Q5SQ13 230 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 TEX43Q6ZNM6 134 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 FAM216BQ8N7L0 139 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 OR2T6Q8NHC8 308 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 NEUROG1Q92886 237 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 RCHY1Q96PM5 261 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 GNB1LQ9BYB4 327 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 NRN1Q9NPD7 142 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 PLSCR4Q9NRQ2 329 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 PRNDQ9UKY0 176 aa6.16□□□□□ -1.42
SMARCC1-202ENST00000425518 TRAV9-1A0A075B6T8 112 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 CX3CL1P78423 397 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 Q0VG73 95 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 IBA57Q5T440 356 aaKnown RBP6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 ZNF503Q96F45 646 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 TMEM208Q9BTX3 173 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 CHODLQ9H9P2 273 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 TUBG2Q9NRH3 451 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 YLPM1P49750 1951 aaKnown RBP6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 TRAV34A0A0B4J273 112 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 TEX50A0A1B0GTY4 177 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 M0QZK8 103 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 REG1BP48304 166 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 TAS2R45P59539 299 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 PRR27Q6MZM9 219 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 C20orf144Q9BQM9 153 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 DCAF16Q9NXF7 216 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 PPIAL4AQ9Y536 164 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 SLC25A15Q9Y619 301 aa6.15□□□□□ -1.42
SMARCC1-202ENST00000425518 UPK2O00526 184 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 CT45A6P0DMU7 189 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 CT45A5P0DMU8 189 aa6.15□□□□□ -1.43
SMARCC1-202ENST00000425518 CT45A7P0DMV0 189 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms