RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 IGHV1-46P01743 117 aa8.75□□□□□ -1.01
CUX1-205ENST00000425244 PFN1P07737 140 aaKnown RBP8.75□□□□□ -1.01
CUX1-205ENST00000425244 OR4A47Q6IF82 309 aa8.75□□□□□ -1.01
CUX1-205ENST00000425244 USP9XQ93008 2570 aaPredicted RBP8.75□□□□□ -1.01
CUX1-205ENST00000425244 CENPEQ02224 2701 aa8.75□□□□□ -1.01
CUX1-205ENST00000425244 CSMD2Q7Z408 3487 aa8.75□□□□□ -1.01
CUX1-205ENST00000425244 PGPEP1LA6NFU8 196 aa8.75□□□□□ -1.01
CUX1-205ENST00000425244 FAM90A9PA6NNJ1 464 aa8.75□□□□□ -1.01
CUX1-205ENST00000425244 TGOLN2O43493 480 aa8.75□□□□□ -1.01
CUX1-205ENST00000425244 HNF1AP20823 631 aa8.75□□□□□ -1.01
CUX1-205ENST00000425244 GNB1P62873 340 aa8.75□□□□□ -1.01
CUX1-205ENST00000425244 TET2Q6N021 2002 aaPredicted RBP8.75□□□□□ -1.01
CUX1-205ENST00000425244 GGTLC1Q9BX51 225 aa8.75□□□□□ -1.01
CUX1-205ENST00000425244 ELOA3CA0A087WX78 387 aaPredicted RBP8.74□□□□□ -1.01
CUX1-205ENST00000425244 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.74□□□□□ -1.01
CUX1-205ENST00000425244 MMP23AO75900 390 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 HRASP01112 189 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 OPRK1P41145 380 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 KIR2DS2P43631 304 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 RBX1P62877 108 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 CCL8P80075 99 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 CR1LQ2VPA4 569 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 ETFRF1Q6IPR1 90 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 OR52E5Q8NH55 327 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 DDB2Q92466 427 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 RNASE6Q93091 150 aaKnown RBP8.74□□□□□ -1.01
CUX1-205ENST00000425244 SRD5A3Q9H8P0 318 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 SVEP1Q4LDE5 3571 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 IGLV3-9A0A075B6K5 115 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 C15orf61A6NNL5 157 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 ITGB1BP1O14713 200 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 PLAUP00749 431 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 OR4A8P0C604 315 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 NPY1RP25929 384 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 SLC24A4Q8NFF2 622 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 DIRC2Q96SL1 478 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 NGBQ9NPG2 151 aa8.74□□□□□ -1.01
CUX1-205ENST00000425244 MPDU1O75352 247 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 CA2P00918 260 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 CGB3P0DN86 165 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 CGB7P0DN87 165 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 IRF2P14316 349 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 TNFSF4P23510 183 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 FAM3BP58499 235 aaPredicted RBP8.73□□□□□ -1.01
CUX1-205ENST00000425244 FAM78BQ5VT40 261 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 NOL4LQ96MY1 436 aaPredicted RBP8.73□□□□□ -1.01
CUX1-205ENST00000425244 GAFA1Q96PS6 74 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 A0A0U1RQK1 487 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 PHOX2AO14813 284 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 TMPRSS2O15393 492 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 PDE6DO43924 150 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 THBS3P49746 956 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 ARSJQ5FYB0 599 aaPredicted RBP8.73□□□□□ -1.01
CUX1-205ENST00000425244 SPATA31B1PQ5VZV4 182 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 STUMQ69YW2 141 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 TCF23Q7RTU1 214 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 OR2T10Q8NGZ9 312 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 TMEM37Q8WXS4 190 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 PACRGQ96M98 296 aaPredicted RBP8.73□□□□□ -1.01
CUX1-205ENST00000425244 IDI2-AS1Q9NZ38 188 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 OR51B2Q9Y5P1 312 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 PRSS46E5RG02 174 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 ACTL6BO94805 426 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 IL6RP08887 468 aaPredicted RBP8.73□□□□□ -1.01
CUX1-205ENST00000425244 HSPE1P61604 102 aaKnown RBP8.73□□□□□ -1.01
CUX1-205ENST00000425244 DMRTA1Q5VZB9 504 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 C1orf122Q6ZSJ8 110 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 LINC01551Q86U37 167 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 STPG3Q8N7X2 389 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 ZNF114Q8NC26 417 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 C22orf15Q8WYQ4 148 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 ANAPC16Q96DE5 110 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 SNHG12Q9BXW3 62 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 NPVFQ9HCQ7 196 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 RAB9BQ9NP90 201 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 PITPNC1Q9UKF7 332 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 FUT9Q9Y231 359 aa8.73□□□□□ -1.01
CUX1-205ENST00000425244 SCO2A0A1W2PP80 73 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 XKRY2A2RUG3 117 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 IGKV1-16P04430 117 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 GATA4P43694 442 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 ADIPOQQ15848 244 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 HIST1H2BLQ99880 126 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 SEPSECSQ9HD40 501 aaKnown RBP8.72□□□□□ -1.01
CUX1-205ENST00000425244 KCNIP2Q9NS61 270 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 IL19Q9UHD0 177 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 HSBP1L1C9JCN9 74 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 VENTXO95231 258 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 CXorf1O96002 111 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 TEPPQ6URK8 271 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 OR5R1Q8NH85 324 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 FAM222BQ8WU58 562 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 RAB1CQ92928 201 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 FAM208BQ5VWN6 2430 aa8.72□□□□□ -1.01
CUX1-205ENST00000425244 ARFGEF3Q5TH69 2177 aa8.71□□□□□ -1.01
CUX1-205ENST00000425244 CD3EP07766 207 aa8.71□□□□□ -1.01
CUX1-205ENST00000425244 IGFBP2P18065 325 aa8.71□□□□□ -1.01
CUX1-205ENST00000425244 RAB31Q13636 194 aa8.71□□□□□ -1.01
CUX1-205ENST00000425244 C3orf36Q3SXR2 165 aa8.71□□□□□ -1.01
CUX1-205ENST00000425244 KCNIP4Q6PIL6 250 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms