RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 ZNF439Q8NDP4 499 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 TAF15Q92804 592 aaKnown RBP eCLIP5.86□□□□□ -1.47
LSM8-204ENST00000424702 MISP3Q96FF7 219 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 GINS3Q9BRX5 216 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 TMEM231Q9H6L2 316 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 CYTL1Q9NRR1 136 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 RAB19A4D1S5 217 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 M0R036 132 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 ZFP36P26651 326 aaKnown RBP5.86□□□□□ -1.47
LSM8-204ENST00000424702 UQCC3Q6UW78 93 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 TCF23Q7RTU1 214 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 ZNF429Q86V71 674 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 SIGLECL1Q8N7X8 197 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 EAF1Q96JC9 268 aaPredicted RBP5.86□□□□□ -1.47
LSM8-204ENST00000424702 FBXL15Q9H469 300 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 NPVFQ9HCQ7 196 aa5.86□□□□□ -1.47
LSM8-204ENST00000424702 RELNP78509 3460 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 MPDU1O75352 247 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 RELBQ01201 579 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 Q56UQ5 140 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 RSG1Q9BU20 258 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 FOXA2Q9Y261 457 aaPredicted RBP5.85□□□□□ -1.47
LSM8-204ENST00000424702 CELSR3Q9NYQ7 3312 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 CENPVL3A0A0U1RRI6 287 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 VENTXO95231 258 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 IGKV1-16P04430 117 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 C5orf64Q2M2E5 130 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 ACSM6Q6P461 480 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 OR5AN1Q8NGI8 311 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 OR4P4Q8NGL7 312 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 BSCL2Q96G97 398 aaPredicted RBP5.85□□□□□ -1.47
LSM8-204ENST00000424702 C5orf30Q96GV9 206 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 SH3BGRL3Q9H299 93 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 ZNF257Q9Y2Q1 563 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 DOCK11Q5JSL3 2073 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 TRAV3A0A0B4J244 114 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 A0A0U1RQK1 487 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 ATF4P18848 351 aaPredicted RBP5.85□□□□□ -1.47
LSM8-204ENST00000424702 TEPPQ6URK8 271 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 DPPA3Q6W0C5 159 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 C12orf54Q6X4T0 127 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 OR10G4Q8NGN3 311 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 OR10G9Q8NGN4 311 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 OR10G7Q8NGN6 311 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 TMEM167AQ8TBQ9 72 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 GPR61Q9BZJ8 451 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 FREM2Q5SZK8 3169 aa5.85□□□□□ -1.47
LSM8-204ENST00000424702 RNASEK-C17orf49H0YIS7 233 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 LY6G6DO95868 133 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 CA2P00918 260 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 PRCDQ00LT1 54 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 DEFB112Q30KQ8 113 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 WDR61Q9GZS3 305 aaKnown RBP5.84□□□□□ -1.47
LSM8-204ENST00000424702 WFDC1Q9HC57 220 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 GNG13Q9P2W3 67 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 ZMAT5Q9UDW3 170 aaKnown RBP5.84□□□□□ -1.47
LSM8-204ENST00000424702 RNF114Q9Y508 228 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 HIVEP2P31629 2446 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 CCDC168Q8NDH2 2452 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 TRAV30A0A087WSZ9 112 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 MAP1LC3B2A6NCE7 125 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 APELAP0DMC3 54 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 SPP1P10451 314 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 PSMB3P49720 205 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 DLX1P56177 255 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 DLK1P80370 383 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 ATP5G2Q06055 141 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 PSG5Q15238 335 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 GUK1Q16774 197 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 HAGHQ16775 308 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 TMEM41BQ5BJD5 291 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 EEF1AKMT3Q96AZ1 226 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 PSMG3Q9BT73 122 aaPredicted RBP5.84□□□□□ -1.47
LSM8-204ENST00000424702 GGACTQ9BVM4 153 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 MAP1LC3BQ9GZQ8 125 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 TMEM14EPQ6UXP3 125 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 SVBPQ8N300 66 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 MED9Q9NWA0 146 aa5.84□□□□□ -1.47
LSM8-204ENST00000424702 TEX50A0A1B0GTY4 177 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 NUPL2O15504 423 aaKnown RBP5.83□□□□□ -1.48
LSM8-204ENST00000424702 TMEM50AO95807 157 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 CDC34P49427 236 aaPredicted RBP5.83□□□□□ -1.48
LSM8-204ENST00000424702 PAX9P55771 341 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 TAS2R45P59539 299 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 FOXL1Q12952 345 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 POU2AF1Q16633 256 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 SOHLH1Q5JUK2 328 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 CST9LP1Q5W188 147 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 SLC25A22Q9H936 323 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 PSMB11A5LHX3 300 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 GNG7O60262 68 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 SNAPINO95295 136 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 ZNF137PP52743 207 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 DLX6P56179 175 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 B2MP61769 119 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 PRSS8Q16651 343 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 TUSC1Q2TAM9 212 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 HCP5Q6MZN7 132 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 Q8N7P7 452 aa5.83□□□□□ -1.48
LSM8-204ENST00000424702 DDB2Q92466 427 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms